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Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images
We develop neural-network-based methods for classifying plaque types in clinical intravascular optical coherence tomography (IVOCT) images of coronary arteries. A single IVOCT pullback can consist of [Formula: see text] microscopic-resolution images, creating both a challenge for physician interpret...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Society of Photo-Optical Instrumentation Engineers
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6275844/ https://www.ncbi.nlm.nih.gov/pubmed/30525060 http://dx.doi.org/10.1117/1.JMI.5.4.044504 |
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author | Kolluru, Chaitanya Prabhu, David Gharaibeh, Yazan Bezerra, Hiram Guagliumi, Giulio Wilson, David |
author_facet | Kolluru, Chaitanya Prabhu, David Gharaibeh, Yazan Bezerra, Hiram Guagliumi, Giulio Wilson, David |
author_sort | Kolluru, Chaitanya |
collection | PubMed |
description | We develop neural-network-based methods for classifying plaque types in clinical intravascular optical coherence tomography (IVOCT) images of coronary arteries. A single IVOCT pullback can consist of [Formula: see text] microscopic-resolution images, creating both a challenge for physician interpretation during an interventional procedure and an opportunity for automated analysis. In the proposed method, we classify each A-line, a datum element that better captures physics and pathophysiology than a voxel, as a fibrous layer followed by calcification (fibrocalcific), a fibrous layer followed by a lipidous deposit (fibrolipidic), or other. For A-line classification, the usefulness of a convolutional neural network (CNN) is compared with that of a fully connected artificial neural network (ANN). A total of 4469 image frames across 48 pullbacks that are manually labeled using consensus labeling from two experts are used for training, evaluation, and testing. A 10-fold cross-validation using held-out pullbacks is applied to assess classifier performance. Noisy A-line classifications are cleaned by applying a conditional random field (CRF) and morphological processing to pullbacks in the en-face view. With CNN (ANN) approaches, we achieve an accuracy of [Formula: see text] ([Formula: see text]) for fibrocalcific, [Formula: see text] ([Formula: see text]) for fibrolipidic, and [Formula: see text] ([Formula: see text]) for other, across all folds following CRF noise cleaning. The results without CRF cleaning are typically reduced by 10% to 15%. The enhanced performance of the CNN was likely due to spatial invariance of the convolution operation over the input A-line. The predicted en-face classification maps of entire pullbacks agree favorably to the annotated counterparts. In some instances, small error regions are actually hard to call when re-examined by human experts. Even in worst-case pullbacks, it can be argued that the results will not negatively impact usage by physicians, as there is a preponderance of correct calls. |
format | Online Article Text |
id | pubmed-6275844 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Society of Photo-Optical Instrumentation Engineers |
record_format | MEDLINE/PubMed |
spelling | pubmed-62758442019-12-04 Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images Kolluru, Chaitanya Prabhu, David Gharaibeh, Yazan Bezerra, Hiram Guagliumi, Giulio Wilson, David J Med Imaging (Bellingham) Computer-Aided Diagnosis We develop neural-network-based methods for classifying plaque types in clinical intravascular optical coherence tomography (IVOCT) images of coronary arteries. A single IVOCT pullback can consist of [Formula: see text] microscopic-resolution images, creating both a challenge for physician interpretation during an interventional procedure and an opportunity for automated analysis. In the proposed method, we classify each A-line, a datum element that better captures physics and pathophysiology than a voxel, as a fibrous layer followed by calcification (fibrocalcific), a fibrous layer followed by a lipidous deposit (fibrolipidic), or other. For A-line classification, the usefulness of a convolutional neural network (CNN) is compared with that of a fully connected artificial neural network (ANN). A total of 4469 image frames across 48 pullbacks that are manually labeled using consensus labeling from two experts are used for training, evaluation, and testing. A 10-fold cross-validation using held-out pullbacks is applied to assess classifier performance. Noisy A-line classifications are cleaned by applying a conditional random field (CRF) and morphological processing to pullbacks in the en-face view. With CNN (ANN) approaches, we achieve an accuracy of [Formula: see text] ([Formula: see text]) for fibrocalcific, [Formula: see text] ([Formula: see text]) for fibrolipidic, and [Formula: see text] ([Formula: see text]) for other, across all folds following CRF noise cleaning. The results without CRF cleaning are typically reduced by 10% to 15%. The enhanced performance of the CNN was likely due to spatial invariance of the convolution operation over the input A-line. The predicted en-face classification maps of entire pullbacks agree favorably to the annotated counterparts. In some instances, small error regions are actually hard to call when re-examined by human experts. Even in worst-case pullbacks, it can be argued that the results will not negatively impact usage by physicians, as there is a preponderance of correct calls. Society of Photo-Optical Instrumentation Engineers 2018-12-03 2018-10 /pmc/articles/PMC6275844/ /pubmed/30525060 http://dx.doi.org/10.1117/1.JMI.5.4.044504 Text en © The Authors. https://creativecommons.org/licenses/by/3.0/ Published by SPIE under a Creative Commons Attribution 3.0 Unported License. Distribution or reproduction of this work in whole or in part requires full attribution of the original publication, including its DOI. |
spellingShingle | Computer-Aided Diagnosis Kolluru, Chaitanya Prabhu, David Gharaibeh, Yazan Bezerra, Hiram Guagliumi, Giulio Wilson, David Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images |
title | Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images |
title_full | Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images |
title_fullStr | Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images |
title_full_unstemmed | Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images |
title_short | Deep neural networks for A-line-based plaque classification in coronary intravascular optical coherence tomography images |
title_sort | deep neural networks for a-line-based plaque classification in coronary intravascular optical coherence tomography images |
topic | Computer-Aided Diagnosis |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6275844/ https://www.ncbi.nlm.nih.gov/pubmed/30525060 http://dx.doi.org/10.1117/1.JMI.5.4.044504 |
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