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Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity
The global response to the most recent EBOV outbreak has led to increased generation and availability of data, which can be globally analyzed to increase our understanding of immune responses to EBOV. We analyzed the published antibody epitope data to identify regions immunogenic for humans on the m...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6276448/ https://www.ncbi.nlm.nih.gov/pubmed/30581874 http://dx.doi.org/10.1155/2018/1846207 |
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author | Vaughan, Kerrie Xu, Xiaojun Peters, Bjoern Sette, Alessandro |
author_facet | Vaughan, Kerrie Xu, Xiaojun Peters, Bjoern Sette, Alessandro |
author_sort | Vaughan, Kerrie |
collection | PubMed |
description | The global response to the most recent EBOV outbreak has led to increased generation and availability of data, which can be globally analyzed to increase our understanding of immune responses to EBOV. We analyzed the published antibody epitope data to identify regions immunogenic for humans on the main GP antigenic target and determine sequence variance/nonsynonymous mutations between historical isolates and variants from the 2013-2016 outbreak. Approximately half of the GP sequence has been reported as targeted by antibody responses. Our results show an enrichment of nonsynonymous mutations (NSMs) within epitopic regions on GP (70%, p = 0.0133). Mapping NSMs to human epitope reactivity may be useful for future therapeutic and prophylaxis development as well as for our general understanding of immunity against EBOV. |
format | Online Article Text |
id | pubmed-6276448 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-62764482018-12-23 Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity Vaughan, Kerrie Xu, Xiaojun Peters, Bjoern Sette, Alessandro J Immunol Res Research Article The global response to the most recent EBOV outbreak has led to increased generation and availability of data, which can be globally analyzed to increase our understanding of immune responses to EBOV. We analyzed the published antibody epitope data to identify regions immunogenic for humans on the main GP antigenic target and determine sequence variance/nonsynonymous mutations between historical isolates and variants from the 2013-2016 outbreak. Approximately half of the GP sequence has been reported as targeted by antibody responses. Our results show an enrichment of nonsynonymous mutations (NSMs) within epitopic regions on GP (70%, p = 0.0133). Mapping NSMs to human epitope reactivity may be useful for future therapeutic and prophylaxis development as well as for our general understanding of immunity against EBOV. Hindawi 2018-11-15 /pmc/articles/PMC6276448/ /pubmed/30581874 http://dx.doi.org/10.1155/2018/1846207 Text en Copyright © 2018 Kerrie Vaughan et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Vaughan, Kerrie Xu, Xiaojun Peters, Bjoern Sette, Alessandro Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity |
title | Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity |
title_full | Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity |
title_fullStr | Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity |
title_full_unstemmed | Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity |
title_short | Investigation of Outbreak-Specific Nonsynonymous Mutations on Ebolavirus GP in the Context of Known Immune Reactivity |
title_sort | investigation of outbreak-specific nonsynonymous mutations on ebolavirus gp in the context of known immune reactivity |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6276448/ https://www.ncbi.nlm.nih.gov/pubmed/30581874 http://dx.doi.org/10.1155/2018/1846207 |
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