Cargando…

A New Phylogenetic Framework for the Animal-Adapted Mycobacterium tuberculosis Complex

Tuberculosis (TB) affects humans and other animals and is caused by bacteria from the Mycobacterium tuberculosis complex (MTBC). Previous studies have shown that there are at least nine members of the MTBC infecting animals other than humans; these have also been referred to as ecotypes. However, th...

Descripción completa

Detalles Bibliográficos
Autores principales:	Brites, Daniela, Loiseau, Chloé, Menardo, Fabrizio, Borrell, Sonia, Boniotti, Maria Beatrice, Warren, Robin, Dippenaar, Anzaan, Parsons, Sven David Charles, Beisel, Christian, Behr, Marcel A., Fyfe, Janet A., Coscolla, Mireia, Gagneux, Sebastien
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2018
Materias:	Microbiology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6277475/ https://www.ncbi.nlm.nih.gov/pubmed/30538680 http://dx.doi.org/10.3389/fmicb.2018.02820

Ejemplares similares

Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity
por: Menardo, Fabrizio, et al.
Publicado: (2018)

Effect of compensatory evolution in the emergence and transmission of rifampicin-resistant Mycobacterium tuberculosis in Cape Town, South Africa: a genomic epidemiology study
por: Goig, Galo A, et al.
Publicado: (2023)

Reference set of Mycobacterium tuberculosis clinical strains: A tool for research and product development
por: Borrell, Sònia, et al.
Publicado: (2019)

The molecular clock of Mycobacterium tuberculosis
por: Menardo, Fabrizio, et al.
Publicado: (2019)

Transition bias influences the evolution of antibiotic resistance in Mycobacterium tuberculosis
por: Payne, Joshua L., et al.
Publicado: (2019)

An African origin for Mycobacterium bovis
por: Loiseau, Chloé, et al.
Publicado: (2020)

Phylogenomics of Mycobacterium africanum reveals a new lineage and a complex evolutionary history
por: Coscolla, Mireia, et al.
Publicado: (2021)

Two New Rapid SNP-Typing Methods for Classifying Mycobacterium tuberculosis Complex into the Main Phylogenetic Lineages
por: Stucki, David, et al.
Publicado: (2012)

Multiple Merger Genealogies in Outbreaks of Mycobacterium tuberculosis
por: Menardo, Fabrizio, et al.
Publicado: (2020)

Potential contribution of HIV during first-line tuberculosis treatment to subsequent rifampicin-monoresistant tuberculosis and acquired tuberculosis drug resistance in South Africa: a retrospective molecular epidemiology study
por: Cox, Helen, et al.
Publicado: (2021)

Tuberculosis in Swiss captive Asian elephants: microevolution of Mycobacterium tuberculosis characterized by multilocus variable-number tandem-repeat analysis and whole-genome sequencing
por: Ghielmetti, Giovanni, et al.
Publicado: (2017)

KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes
por: Steiner, Andreas, et al.
Publicado: (2014)

Rifampicin-Monoresistant Tuberculosis Is Not the Same as Multidrug-Resistant Tuberculosis: a Descriptive Study from Khayelitsha, South Africa
por: Salaam-Dreyer, Zubeida, et al.
Publicado: (2021)

Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim
por: Menardo, Fabrizio, et al.
Publicado: (2021)

Understanding drivers of phylogenetic clustering and terminal branch lengths distribution in epidemics of Mycobacterium tuberculosis
por: Menardo, Fabrizio
Publicado: (2022)

First Insights into the Phylogenetic Diversity of Mycobacterium tuberculosis in Nepal
por: Malla, Bijaya, et al.
Publicado: (2012)

Co-evolution of Mycobacterium tuberculosis and Homo sapiens
por: Brites, Daniela, et al.
Publicado: (2015)

The relative transmission fitness of multidrug-resistant Mycobacterium tuberculosis in a drug resistance hotspot
por: Loiseau, Chloé, et al.
Publicado: (2023)

Mapping of Genotype–Phenotype Diversity among Clinical Isolates of Mycobacterium tuberculosis by Sequence-Based Transcriptional Profiling
por: Rose, Graham, et al.
Publicado: (2013)

The Genetic Background Modulates the Evolution of Fluoroquinolone-Resistance in Mycobacterium tuberculosis
por: Castro, Rhastin A D, et al.
Publicado: (2020)

Drug resistance-conferring mutations in Mycobacterium tuberculosis from Madang, Papua New Guinea
por: Ballif, Marie, et al.
Publicado: (2012)

Fighting an old disease with next-generation sequencing
por: Dippenaar, Anzaan, et al.
Publicado: (2015)

Tuberculosis outbreak investigation using phylodynamic analysis
por: Kühnert, Denise, et al.
Publicado: (2018)

Whole-Genome Sequencing Has the Potential To Improve Treatment for Rifampicin-Resistant Tuberculosis in High-Burden Settings: a Retrospective Cohort Study
por: Cox, Helen, et al.
Publicado: (2022)

Comparative genomics of Mycobacterium africanum Lineage 5 and Lineage 6 from Ghana suggests distinct ecological niches
por: Otchere, Isaac Darko, et al.
Publicado: (2018)

Sequence Diversity in the pe_pgrs Genes of Mycobacterium tuberculosis Is Independent of Human T Cell Recognition
por: Copin, Richard, et al.
Publicado: (2014)

Evaluation of Nanopore sequencing for Mycobacterium tuberculosis drug susceptibility testing and outbreak investigation: a genomic analysis
por: Hall, Michael B, et al.
Publicado: (2023)

Within Host Evolution Selects for a Dominant Genotype of Mycobacterium tuberculosis while T Cells Increase Pathogen Genetic Diversity
por: Copin, Richard, et al.
Publicado: (2016)

Detection of minor variants in Mycobacterium tuberculosis whole genome sequencing data
por: Goossens, Sander N, et al.
Publicado: (2021)

Spatial Distribution of Drug-Resistant Mycobacterium tuberculosis Infections in Rural Eastern Cape Province of South Africa
por: Faye, Lindiwe M., et al.
Publicado: (2023)

The within-host evolution of antimicrobial resistance in Mycobacterium tuberculosis
por: Castro, Rhastin A D, et al.
Publicado: (2020)

Lipidomics and genomics of Mycobacterium tuberculosis reveal lineage-specific trends in mycolic acid biosynthesis
por: Portevin, Damien, et al.
Publicado: (2014)

The Detection of Mutations and Genotyping of Drug-Resistant Mycobacterium tuberculosis Strains Isolated from Patients in the Rural Eastern Cape Province
por: Faye, Lindiwe M., et al.
Publicado: (2023)

A sister lineage of the Mycobacterium tuberculosis complex discovered in the African Great Lakes region
por: Ngabonziza, Jean Claude Semuto, et al.
Publicado: (2020)

Rifampicin Resistant Tuberculosis in Lesotho: Diagnosis, Treatment Initiation and Outcomes
por: Katende, Bulemba, et al.
Publicado: (2020)

Nanopore Sequencing for Mycobacterium tuberculosis: a Critical Review of the Literature, New Developments, and Future Opportunities
por: Dippenaar, Anzaan, et al.
Publicado: (2022)

DNA replication fidelity in Mycobacterium tuberculosis is mediated by an ancestral prokaryotic proofreader
por: Rock, Jeremy M., et al.
Publicado: (2015)

Capacity building for whole genome sequencing of Mycobacterium tuberculosis and bioinformatics in high TB burden countries
por: Rivière, Emmanuel, et al.
Publicado: (2020)

HIV Coinfection Is Associated with Low-Fitness rpoB Variants in Rifampicin-Resistant Mycobacterium tuberculosis
por: Loiseau, Chloé, et al.
Publicado: (2020)

Comprehensive Characterization of the Attenuated Double Auxotroph Mycobacterium tuberculosisΔleuDΔpanCD as an Alternative to H37Rv
por: Mouton, Jomien M., et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_03t9j04aj3qu6s6q61s14kvola