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Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study
The mechanism of the addition of indazole (Ind)—a bifunctional aromatic N,NH-nucleophile—to cyclohexyl isocyanide coordinated to the palladium(II) center in the model complex cis-[PdCl(2)(CNMe)(CNCy)] (1) to give the corresponding aminocarbene ligand was investigated in detail by theoretical (DFT) m...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6278333/ https://www.ncbi.nlm.nih.gov/pubmed/30423833 http://dx.doi.org/10.3390/molecules23112942 |
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author | Casella, Girolamo Casarin, Maurizio Kukushkin, Vadim Yu. Kuznetsov, Maxim L. |
author_facet | Casella, Girolamo Casarin, Maurizio Kukushkin, Vadim Yu. Kuznetsov, Maxim L. |
author_sort | Casella, Girolamo |
collection | PubMed |
description | The mechanism of the addition of indazole (Ind)—a bifunctional aromatic N,NH-nucleophile—to cyclohexyl isocyanide coordinated to the palladium(II) center in the model complex cis-[PdCl(2)(CNMe)(CNCy)] (1) to give the corresponding aminocarbene ligand was investigated in detail by theoretical (DFT) methods. The most plausible mechanism of this reaction is that of the associative type involving nucleophilic attack of Ind by its unprotonated N atom at the isocyanide carbon atom followed by the stepwise proton transfer from the nucleophile molecule to the isocyanide N atom via deprotonation/protonation steps. Two reaction channels based on two tautomeric forms of indazole were found. The channel leading to the experimentally isolated aminocarbene product is based on the less stable tautomeric form. Another channel based on the more stable tautomer of Ind is slightly kinetically more favorable but it is endergonic. Thus, the regioselectivity of this reaction is thermodynamically rather than kinetically driven. The bonding situation in key species was analyzed. |
format | Online Article Text |
id | pubmed-6278333 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-62783332018-12-13 Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study Casella, Girolamo Casarin, Maurizio Kukushkin, Vadim Yu. Kuznetsov, Maxim L. Molecules Article The mechanism of the addition of indazole (Ind)—a bifunctional aromatic N,NH-nucleophile—to cyclohexyl isocyanide coordinated to the palladium(II) center in the model complex cis-[PdCl(2)(CNMe)(CNCy)] (1) to give the corresponding aminocarbene ligand was investigated in detail by theoretical (DFT) methods. The most plausible mechanism of this reaction is that of the associative type involving nucleophilic attack of Ind by its unprotonated N atom at the isocyanide carbon atom followed by the stepwise proton transfer from the nucleophile molecule to the isocyanide N atom via deprotonation/protonation steps. Two reaction channels based on two tautomeric forms of indazole were found. The channel leading to the experimentally isolated aminocarbene product is based on the less stable tautomeric form. Another channel based on the more stable tautomer of Ind is slightly kinetically more favorable but it is endergonic. Thus, the regioselectivity of this reaction is thermodynamically rather than kinetically driven. The bonding situation in key species was analyzed. MDPI 2018-11-10 /pmc/articles/PMC6278333/ /pubmed/30423833 http://dx.doi.org/10.3390/molecules23112942 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Casella, Girolamo Casarin, Maurizio Kukushkin, Vadim Yu. Kuznetsov, Maxim L. Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study |
title | Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study |
title_full | Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study |
title_fullStr | Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study |
title_full_unstemmed | Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study |
title_short | Reaction between Indazole and Pd-Bound Isocyanides—A Theoretical Mechanistic Study |
title_sort | reaction between indazole and pd-bound isocyanides—a theoretical mechanistic study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6278333/ https://www.ncbi.nlm.nih.gov/pubmed/30423833 http://dx.doi.org/10.3390/molecules23112942 |
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