Cargando…

Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction

BACKGROUND: Cardiac hypertrophy and acute myocardial infarction (AMI) are two common heart diseases worldwide. However, research is needed into the exact pathogenesis and effective treatment strategies for these diseases. Recently, microRNAs (miRNAs) have been suggested to regulate the pathological...

Descripción completa

Detalles Bibliográficos
Autores principales: Sun, Jiantao, Yang, Jiemei, Chi, Jing, Ding, Xue, Lv, Nan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6280539/
https://www.ncbi.nlm.nih.gov/pubmed/30514363
http://dx.doi.org/10.1186/s40246-018-0184-0
_version_ 1783378700087066624
author Sun, Jiantao
Yang, Jiemei
Chi, Jing
Ding, Xue
Lv, Nan
author_facet Sun, Jiantao
Yang, Jiemei
Chi, Jing
Ding, Xue
Lv, Nan
author_sort Sun, Jiantao
collection PubMed
description BACKGROUND: Cardiac hypertrophy and acute myocardial infarction (AMI) are two common heart diseases worldwide. However, research is needed into the exact pathogenesis and effective treatment strategies for these diseases. Recently, microRNAs (miRNAs) have been suggested to regulate the pathological pathways of heart disease, indicating a potential role in novel treatments. RESULTS: In our study, we constructed a miRNA-gene-drug network and analyzed its topological features. We also identified some significantly dysregulated miRNA-gene-drug triplets (MGDTs) in cardiac hypertrophy and AMI using a computational method. Then, we characterized the activity score profile features for MGDTs in cardiac hypertrophy and AMI. The functional analyses suggested that the genes in the network held special functions. We extracted an insulin-like growth factor 1 receptor-related subnetwork in cardiac hypertrophy and a vascular endothelial growth factor A-related subnetwork in AMI. Finally, we considered insulin-like growth factor 1 receptor and vascular endothelial growth factor A as two candidate drug targets by utilizing the cardiac hypertrophy and AMI pathways. CONCLUSION: These results provide novel insights into the mechanisms and treatment of cardiac hypertrophy and AMI.
format Online
Article
Text
id pubmed-6280539
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-62805392018-12-10 Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction Sun, Jiantao Yang, Jiemei Chi, Jing Ding, Xue Lv, Nan Hum Genomics Primary Research BACKGROUND: Cardiac hypertrophy and acute myocardial infarction (AMI) are two common heart diseases worldwide. However, research is needed into the exact pathogenesis and effective treatment strategies for these diseases. Recently, microRNAs (miRNAs) have been suggested to regulate the pathological pathways of heart disease, indicating a potential role in novel treatments. RESULTS: In our study, we constructed a miRNA-gene-drug network and analyzed its topological features. We also identified some significantly dysregulated miRNA-gene-drug triplets (MGDTs) in cardiac hypertrophy and AMI using a computational method. Then, we characterized the activity score profile features for MGDTs in cardiac hypertrophy and AMI. The functional analyses suggested that the genes in the network held special functions. We extracted an insulin-like growth factor 1 receptor-related subnetwork in cardiac hypertrophy and a vascular endothelial growth factor A-related subnetwork in AMI. Finally, we considered insulin-like growth factor 1 receptor and vascular endothelial growth factor A as two candidate drug targets by utilizing the cardiac hypertrophy and AMI pathways. CONCLUSION: These results provide novel insights into the mechanisms and treatment of cardiac hypertrophy and AMI. BioMed Central 2018-12-04 /pmc/articles/PMC6280539/ /pubmed/30514363 http://dx.doi.org/10.1186/s40246-018-0184-0 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Primary Research
Sun, Jiantao
Yang, Jiemei
Chi, Jing
Ding, Xue
Lv, Nan
Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction
title Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction
title_full Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction
title_fullStr Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction
title_full_unstemmed Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction
title_short Identification of drug repurposing candidates based on a miRNA-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction
title_sort identification of drug repurposing candidates based on a mirna-mediated drug and pathway network for cardiac hypertrophy and acute myocardial infarction
topic Primary Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6280539/
https://www.ncbi.nlm.nih.gov/pubmed/30514363
http://dx.doi.org/10.1186/s40246-018-0184-0
work_keys_str_mv AT sunjiantao identificationofdrugrepurposingcandidatesbasedonamirnamediateddrugandpathwaynetworkforcardiachypertrophyandacutemyocardialinfarction
AT yangjiemei identificationofdrugrepurposingcandidatesbasedonamirnamediateddrugandpathwaynetworkforcardiachypertrophyandacutemyocardialinfarction
AT chijing identificationofdrugrepurposingcandidatesbasedonamirnamediateddrugandpathwaynetworkforcardiachypertrophyandacutemyocardialinfarction
AT dingxue identificationofdrugrepurposingcandidatesbasedonamirnamediateddrugandpathwaynetworkforcardiachypertrophyandacutemyocardialinfarction
AT lvnan identificationofdrugrepurposingcandidatesbasedonamirnamediateddrugandpathwaynetworkforcardiachypertrophyandacutemyocardialinfarction