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Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings

Modeling spatially explicit data provides a powerful approach to identify the effects of exogenous features associated with biological processes, including recruitment of stream fishes. However, the complex spatial and temporal dynamics of the stream and the species’ reproductive and early life stag...

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Autores principales: Finley, Andrew O., Forsythe, Patrick S., Crossman, James A., Baker, Edward A., Scribner, Kim T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6281228/
https://www.ncbi.nlm.nih.gov/pubmed/30517091
http://dx.doi.org/10.1371/journal.pone.0204150
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author Finley, Andrew O.
Forsythe, Patrick S.
Crossman, James A.
Baker, Edward A.
Scribner, Kim T.
author_facet Finley, Andrew O.
Forsythe, Patrick S.
Crossman, James A.
Baker, Edward A.
Scribner, Kim T.
author_sort Finley, Andrew O.
collection PubMed
description Modeling spatially explicit data provides a powerful approach to identify the effects of exogenous features associated with biological processes, including recruitment of stream fishes. However, the complex spatial and temporal dynamics of the stream and the species’ reproductive and early life stage behaviors present challenges to drawing valid inference using traditional regression models. In these settings it is often difficult to ensure the spatial independence among model residuals—a key assumption that must be met to ensure valid inference. We present statistical models capable of capturing complex residual anisotropic patterns through the addition of spatial random effects within an inferential framework that acknowledges uncertainty in the data and parameters. Proposed models are used to explore the impact of environmental variables on Lake sturgeon (Acipenser fulvescens) reproduction, particularly questions about patterns in egg deposition. Our results demonstrate the need to apply valid statistical methods to identify relationships between response variables, e.g., egg counts, across locations, and environmental covariates in the presence of strong and anisotropic autocorrelation in stream systems. The models may be applied to other settings where gamete distribution or, more generally, other biotic phenomena may be associated with spatially dynamic and anisotropic processes.
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spelling pubmed-62812282018-12-20 Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings Finley, Andrew O. Forsythe, Patrick S. Crossman, James A. Baker, Edward A. Scribner, Kim T. PLoS One Research Article Modeling spatially explicit data provides a powerful approach to identify the effects of exogenous features associated with biological processes, including recruitment of stream fishes. However, the complex spatial and temporal dynamics of the stream and the species’ reproductive and early life stage behaviors present challenges to drawing valid inference using traditional regression models. In these settings it is often difficult to ensure the spatial independence among model residuals—a key assumption that must be met to ensure valid inference. We present statistical models capable of capturing complex residual anisotropic patterns through the addition of spatial random effects within an inferential framework that acknowledges uncertainty in the data and parameters. Proposed models are used to explore the impact of environmental variables on Lake sturgeon (Acipenser fulvescens) reproduction, particularly questions about patterns in egg deposition. Our results demonstrate the need to apply valid statistical methods to identify relationships between response variables, e.g., egg counts, across locations, and environmental covariates in the presence of strong and anisotropic autocorrelation in stream systems. The models may be applied to other settings where gamete distribution or, more generally, other biotic phenomena may be associated with spatially dynamic and anisotropic processes. Public Library of Science 2018-12-05 /pmc/articles/PMC6281228/ /pubmed/30517091 http://dx.doi.org/10.1371/journal.pone.0204150 Text en © 2018 Finley et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Finley, Andrew O.
Forsythe, Patrick S.
Crossman, James A.
Baker, Edward A.
Scribner, Kim T.
Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings
title Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings
title_full Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings
title_fullStr Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings
title_full_unstemmed Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings
title_short Assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: A lake sturgeon case study in natural stream settings
title_sort assessing impact of exogenous features on biotic phenomena in the presence of strong spatial dependence: a lake sturgeon case study in natural stream settings
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6281228/
https://www.ncbi.nlm.nih.gov/pubmed/30517091
http://dx.doi.org/10.1371/journal.pone.0204150
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