Cargando…
Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity
Small non-coding RNAs (sncRNA) are regulators of cell functions and circulating sncRNAs from the majority of RNA classes are potential non-invasive biomarkers. Understanding how common traits influence ncRNA expression is essential for assessing their biomarker potential. In this study, we identify...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6281647/ https://www.ncbi.nlm.nih.gov/pubmed/30518766 http://dx.doi.org/10.1038/s41598-018-35974-4 |
_version_ | 1783378856043872256 |
---|---|
author | Rounge, Trine B. Umu, Sinan U. Keller, Andreas Meese, Eckart Ursin, Giske Tretli, Steinar Lyle, Robert Langseth, Hilde |
author_facet | Rounge, Trine B. Umu, Sinan U. Keller, Andreas Meese, Eckart Ursin, Giske Tretli, Steinar Lyle, Robert Langseth, Hilde |
author_sort | Rounge, Trine B. |
collection | PubMed |
description | Small non-coding RNAs (sncRNA) are regulators of cell functions and circulating sncRNAs from the majority of RNA classes are potential non-invasive biomarkers. Understanding how common traits influence ncRNA expression is essential for assessing their biomarker potential. In this study, we identify associations between sncRNA expression and common traits (sex, age, self-reported smoking, body mass, self-reported physical activity). We used RNAseq data from 526 serum samples from the Janus Serum Bank and traits from health examination surveys. Ageing showed the strongest association with sncRNA expression, both in terms of statistical significance and number of RNAs, regardless of RNA class. piRNAs were abundant in the serum samples and they were associated to sex. Interestingly, smoking cessation generally restored RNA expression to non-smoking levels, although for some sncRNAs smoking-related expression levels persisted. Pathway analysis suggests that smoking-related sncRNAs target the cholinergic synapses and may therefore potentially play a role in smoking addiction. Our results show that common traits influence circulating sncRNA expression. It is clear that sncRNA biomarker analyses should be adjusted for age and sex. In addition, for specific sncRNAs, analyses should also be adjusted for body mass, smoking, physical activity and technical factors. |
format | Online Article Text |
id | pubmed-6281647 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-62816472018-12-07 Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity Rounge, Trine B. Umu, Sinan U. Keller, Andreas Meese, Eckart Ursin, Giske Tretli, Steinar Lyle, Robert Langseth, Hilde Sci Rep Article Small non-coding RNAs (sncRNA) are regulators of cell functions and circulating sncRNAs from the majority of RNA classes are potential non-invasive biomarkers. Understanding how common traits influence ncRNA expression is essential for assessing their biomarker potential. In this study, we identify associations between sncRNA expression and common traits (sex, age, self-reported smoking, body mass, self-reported physical activity). We used RNAseq data from 526 serum samples from the Janus Serum Bank and traits from health examination surveys. Ageing showed the strongest association with sncRNA expression, both in terms of statistical significance and number of RNAs, regardless of RNA class. piRNAs were abundant in the serum samples and they were associated to sex. Interestingly, smoking cessation generally restored RNA expression to non-smoking levels, although for some sncRNAs smoking-related expression levels persisted. Pathway analysis suggests that smoking-related sncRNAs target the cholinergic synapses and may therefore potentially play a role in smoking addiction. Our results show that common traits influence circulating sncRNA expression. It is clear that sncRNA biomarker analyses should be adjusted for age and sex. In addition, for specific sncRNAs, analyses should also be adjusted for body mass, smoking, physical activity and technical factors. Nature Publishing Group UK 2018-12-05 /pmc/articles/PMC6281647/ /pubmed/30518766 http://dx.doi.org/10.1038/s41598-018-35974-4 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Rounge, Trine B. Umu, Sinan U. Keller, Andreas Meese, Eckart Ursin, Giske Tretli, Steinar Lyle, Robert Langseth, Hilde Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity |
title | Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity |
title_full | Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity |
title_fullStr | Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity |
title_full_unstemmed | Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity |
title_short | Circulating small non-coding RNAs associated with age, sex, smoking, body mass and physical activity |
title_sort | circulating small non-coding rnas associated with age, sex, smoking, body mass and physical activity |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6281647/ https://www.ncbi.nlm.nih.gov/pubmed/30518766 http://dx.doi.org/10.1038/s41598-018-35974-4 |
work_keys_str_mv | AT roungetrineb circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity AT umusinanu circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity AT kellerandreas circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity AT meeseeckart circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity AT ursingiske circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity AT tretlisteinar circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity AT lylerobert circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity AT langsethhilde circulatingsmallnoncodingrnasassociatedwithagesexsmokingbodymassandphysicalactivity |