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The use and misuse of herbarium specimens in evaluating plant extinction risks

Herbarium specimens provide verifiable and citable evidence of the occurrence of particular plants at particular points in space and time, and are vital resources for assessing extinction risk in the tropics, where plant diversity and threats to plants are greatest. We reviewed approaches to assessi...

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Autores principales: Nic Lughadha, Eimear, Walker, Barnaby E., Canteiro, Cátia, Chadburn, Helen, Davis, Aaron P., Hargreaves, Serene, Lucas, Eve J., Schuiteman, André, Williams, Emma, Bachman, Steven P., Baines, David, Barker, Amy, Budden, Andrew P., Carretero, Julia, Clarkson, James J., Roberts, Alexandra, Rivers, Malin C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6282085/
https://www.ncbi.nlm.nih.gov/pubmed/30455216
http://dx.doi.org/10.1098/rstb.2017.0402
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author Nic Lughadha, Eimear
Walker, Barnaby E.
Canteiro, Cátia
Chadburn, Helen
Davis, Aaron P.
Hargreaves, Serene
Lucas, Eve J.
Schuiteman, André
Williams, Emma
Bachman, Steven P.
Baines, David
Barker, Amy
Budden, Andrew P.
Carretero, Julia
Clarkson, James J.
Roberts, Alexandra
Rivers, Malin C.
author_facet Nic Lughadha, Eimear
Walker, Barnaby E.
Canteiro, Cátia
Chadburn, Helen
Davis, Aaron P.
Hargreaves, Serene
Lucas, Eve J.
Schuiteman, André
Williams, Emma
Bachman, Steven P.
Baines, David
Barker, Amy
Budden, Andrew P.
Carretero, Julia
Clarkson, James J.
Roberts, Alexandra
Rivers, Malin C.
author_sort Nic Lughadha, Eimear
collection PubMed
description Herbarium specimens provide verifiable and citable evidence of the occurrence of particular plants at particular points in space and time, and are vital resources for assessing extinction risk in the tropics, where plant diversity and threats to plants are greatest. We reviewed approaches to assessing extinction risk in response to the Convention on Biological Diversity's Global Strategy for Plant Conservation Target 2: an assessment of the conservation status of all known plant species by 2020. We tested five alternative approaches, using herbarium-derived data for trees, shrubs and herbs in five different plant groups from temperate and tropical regions. All species were previously fully assessed for the IUCN Red List. We found significant variation in the accuracy with which different approaches classified species as threatened or not threatened. Accuracy was highest for the machine learning model (90%) but the least data-intensive approach also performed well (82%). Despite concerns about spatial, temporal and taxonomic biases and uncertainties in herbarium data, when specimens represent the best available evidence for particular species, their use as a basis for extinction risk assessment is appropriate, necessary and urgent. Resourcing herbaria to maintain, increase and disseminate their specimen data is essential to guide and focus conservation action. This article is part of the theme issue ‘Biological collections for understanding biodiversity in the Anthropocene’.
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spelling pubmed-62820852018-12-06 The use and misuse of herbarium specimens in evaluating plant extinction risks Nic Lughadha, Eimear Walker, Barnaby E. Canteiro, Cátia Chadburn, Helen Davis, Aaron P. Hargreaves, Serene Lucas, Eve J. Schuiteman, André Williams, Emma Bachman, Steven P. Baines, David Barker, Amy Budden, Andrew P. Carretero, Julia Clarkson, James J. Roberts, Alexandra Rivers, Malin C. Philos Trans R Soc Lond B Biol Sci Articles Herbarium specimens provide verifiable and citable evidence of the occurrence of particular plants at particular points in space and time, and are vital resources for assessing extinction risk in the tropics, where plant diversity and threats to plants are greatest. We reviewed approaches to assessing extinction risk in response to the Convention on Biological Diversity's Global Strategy for Plant Conservation Target 2: an assessment of the conservation status of all known plant species by 2020. We tested five alternative approaches, using herbarium-derived data for trees, shrubs and herbs in five different plant groups from temperate and tropical regions. All species were previously fully assessed for the IUCN Red List. We found significant variation in the accuracy with which different approaches classified species as threatened or not threatened. Accuracy was highest for the machine learning model (90%) but the least data-intensive approach also performed well (82%). Despite concerns about spatial, temporal and taxonomic biases and uncertainties in herbarium data, when specimens represent the best available evidence for particular species, their use as a basis for extinction risk assessment is appropriate, necessary and urgent. Resourcing herbaria to maintain, increase and disseminate their specimen data is essential to guide and focus conservation action. This article is part of the theme issue ‘Biological collections for understanding biodiversity in the Anthropocene’. The Royal Society 2019-01-07 2018-11-19 /pmc/articles/PMC6282085/ /pubmed/30455216 http://dx.doi.org/10.1098/rstb.2017.0402 Text en © 2018 The Authors. http://creativecommons.org/licenses/by/4.0/ Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.
spellingShingle Articles
Nic Lughadha, Eimear
Walker, Barnaby E.
Canteiro, Cátia
Chadburn, Helen
Davis, Aaron P.
Hargreaves, Serene
Lucas, Eve J.
Schuiteman, André
Williams, Emma
Bachman, Steven P.
Baines, David
Barker, Amy
Budden, Andrew P.
Carretero, Julia
Clarkson, James J.
Roberts, Alexandra
Rivers, Malin C.
The use and misuse of herbarium specimens in evaluating plant extinction risks
title The use and misuse of herbarium specimens in evaluating plant extinction risks
title_full The use and misuse of herbarium specimens in evaluating plant extinction risks
title_fullStr The use and misuse of herbarium specimens in evaluating plant extinction risks
title_full_unstemmed The use and misuse of herbarium specimens in evaluating plant extinction risks
title_short The use and misuse of herbarium specimens in evaluating plant extinction risks
title_sort use and misuse of herbarium specimens in evaluating plant extinction risks
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6282085/
https://www.ncbi.nlm.nih.gov/pubmed/30455216
http://dx.doi.org/10.1098/rstb.2017.0402
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