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Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis
This article provides supplementary data for the paper “LC–MS/MS method for simultaneous quantification of heparan sulfate and dermatan sulfate in urine by butanolysis derivatization” (Forni et al., 2018). Several parameters were tested to optimize sample preparation by butanolysis in order to carry...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6282625/ https://www.ncbi.nlm.nih.gov/pubmed/30547065 http://dx.doi.org/10.1016/j.dib.2018.11.100 |
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author | Forni, Giulia Malvagia, Sabrina Funghini, Silvia Scolamiero, Emanuela Mura, Massimo Bona, Maria Della Villanelli, Fabio Damiano, Roberta la Marca, Giancarlo |
author_facet | Forni, Giulia Malvagia, Sabrina Funghini, Silvia Scolamiero, Emanuela Mura, Massimo Bona, Maria Della Villanelli, Fabio Damiano, Roberta la Marca, Giancarlo |
author_sort | Forni, Giulia |
collection | PubMed |
description | This article provides supplementary data for the paper “LC–MS/MS method for simultaneous quantification of heparan sulfate and dermatan sulfate in urine by butanolysis derivatization” (Forni et al., 2018). Several parameters were tested to optimize sample preparation by butanolysis in order to carry out simultaneous quantifications of HS and DS by tandem mass spectrometry. Here we describe step-by-step instructions to perform HS and DS analysis in urine samples using external calibration curves of standards of known concentration. Sample are quantified by interpolation from the calibration curve and reported in µg/mL. Then, HS and DS are normalized to creatinine concentration and reported as mg/g uCr. |
format | Online Article Text |
id | pubmed-6282625 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-62826252018-12-13 Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis Forni, Giulia Malvagia, Sabrina Funghini, Silvia Scolamiero, Emanuela Mura, Massimo Bona, Maria Della Villanelli, Fabio Damiano, Roberta la Marca, Giancarlo Data Brief Chemistry This article provides supplementary data for the paper “LC–MS/MS method for simultaneous quantification of heparan sulfate and dermatan sulfate in urine by butanolysis derivatization” (Forni et al., 2018). Several parameters were tested to optimize sample preparation by butanolysis in order to carry out simultaneous quantifications of HS and DS by tandem mass spectrometry. Here we describe step-by-step instructions to perform HS and DS analysis in urine samples using external calibration curves of standards of known concentration. Sample are quantified by interpolation from the calibration curve and reported in µg/mL. Then, HS and DS are normalized to creatinine concentration and reported as mg/g uCr. Elsevier 2018-11-26 /pmc/articles/PMC6282625/ /pubmed/30547065 http://dx.doi.org/10.1016/j.dib.2018.11.100 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Chemistry Forni, Giulia Malvagia, Sabrina Funghini, Silvia Scolamiero, Emanuela Mura, Massimo Bona, Maria Della Villanelli, Fabio Damiano, Roberta la Marca, Giancarlo Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis |
title | Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis |
title_full | Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis |
title_fullStr | Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis |
title_full_unstemmed | Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis |
title_short | Data in support for the measurement of heparan sulfate and dermatan sulfate by LC–MS/MS analysis |
title_sort | data in support for the measurement of heparan sulfate and dermatan sulfate by lc–ms/ms analysis |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6282625/ https://www.ncbi.nlm.nih.gov/pubmed/30547065 http://dx.doi.org/10.1016/j.dib.2018.11.100 |
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