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Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand
Abstract. The authors established the taxonomic status of endophytic fungi associated with leaves of Pandanaceae collected from southern Thailand. Morphotypes were initially identified based on their characteristics in culture and species level identification was done based on both morphological cha...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pensoft Publishers
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6283267/ https://www.ncbi.nlm.nih.gov/pubmed/30532625 http://dx.doi.org/10.3897/mycokeys.33.23670 |
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author | Tibpromma, Saowaluck Hyde, Kevin D. Bhat, Jayarama D. Mortimer, Peter E. Xu, Jianchu Promputtha, Itthayakorn Doilom, Mingkwan Yang, Jun-Bo Tang, Alvin M. C. Karunarathna, Samantha C. |
author_facet | Tibpromma, Saowaluck Hyde, Kevin D. Bhat, Jayarama D. Mortimer, Peter E. Xu, Jianchu Promputtha, Itthayakorn Doilom, Mingkwan Yang, Jun-Bo Tang, Alvin M. C. Karunarathna, Samantha C. |
author_sort | Tibpromma, Saowaluck |
collection | PubMed |
description | Abstract. The authors established the taxonomic status of endophytic fungi associated with leaves of Pandanaceae collected from southern Thailand. Morphotypes were initially identified based on their characteristics in culture and species level identification was done based on both morphological characteristics and phylogenetic analyses of DNA sequence data. Twenty-two isolates from healthy leaves were categorised into eight morphotypes. Appropriate universal primers were used to amplify specific gene regions and phylogenetic analyses were performed to identify these endophytes and established relationships with extant fungi. The authors identified both ascomycete and basidiomycete species, including one new genus, seven new species and nine known species. Morphological descriptions, colour plates and phylogenies are given for each taxon. |
format | Online Article Text |
id | pubmed-6283267 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-62832672018-12-07 Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand Tibpromma, Saowaluck Hyde, Kevin D. Bhat, Jayarama D. Mortimer, Peter E. Xu, Jianchu Promputtha, Itthayakorn Doilom, Mingkwan Yang, Jun-Bo Tang, Alvin M. C. Karunarathna, Samantha C. MycoKeys Research Article Abstract. The authors established the taxonomic status of endophytic fungi associated with leaves of Pandanaceae collected from southern Thailand. Morphotypes were initially identified based on their characteristics in culture and species level identification was done based on both morphological characteristics and phylogenetic analyses of DNA sequence data. Twenty-two isolates from healthy leaves were categorised into eight morphotypes. Appropriate universal primers were used to amplify specific gene regions and phylogenetic analyses were performed to identify these endophytes and established relationships with extant fungi. The authors identified both ascomycete and basidiomycete species, including one new genus, seven new species and nine known species. Morphological descriptions, colour plates and phylogenies are given for each taxon. Pensoft Publishers 2018-03-28 /pmc/articles/PMC6283267/ /pubmed/30532625 http://dx.doi.org/10.3897/mycokeys.33.23670 Text en Saowaluck Tibpromma, Kevin D. Hyde, Jayarama D. Bhat, Peter E. Mortimer, Jianchu Xu, Itthayakorn Promputtha, Mingkwan Doilom, Jun-Bo Yang, Alvin M. C. Tang, Samantha C. Karunarathna http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Tibpromma, Saowaluck Hyde, Kevin D. Bhat, Jayarama D. Mortimer, Peter E. Xu, Jianchu Promputtha, Itthayakorn Doilom, Mingkwan Yang, Jun-Bo Tang, Alvin M. C. Karunarathna, Samantha C. Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand |
title | Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand |
title_full | Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand |
title_fullStr | Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand |
title_full_unstemmed | Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand |
title_short | Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand |
title_sort | identification of endophytic fungi from leaves of pandanaceae based on their morphotypes and dna sequence data from southern thailand |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6283267/ https://www.ncbi.nlm.nih.gov/pubmed/30532625 http://dx.doi.org/10.3897/mycokeys.33.23670 |
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