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Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand

Abstract. The authors established the taxonomic status of endophytic fungi associated with leaves of Pandanaceae collected from southern Thailand. Morphotypes were initially identified based on their characteristics in culture and species level identification was done based on both morphological cha...

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Autores principales: Tibpromma, Saowaluck, Hyde, Kevin D., Bhat, Jayarama D., Mortimer, Peter E., Xu, Jianchu, Promputtha, Itthayakorn, Doilom, Mingkwan, Yang, Jun-Bo, Tang, Alvin M. C., Karunarathna, Samantha C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6283267/
https://www.ncbi.nlm.nih.gov/pubmed/30532625
http://dx.doi.org/10.3897/mycokeys.33.23670
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author Tibpromma, Saowaluck
Hyde, Kevin D.
Bhat, Jayarama D.
Mortimer, Peter E.
Xu, Jianchu
Promputtha, Itthayakorn
Doilom, Mingkwan
Yang, Jun-Bo
Tang, Alvin M. C.
Karunarathna, Samantha C.
author_facet Tibpromma, Saowaluck
Hyde, Kevin D.
Bhat, Jayarama D.
Mortimer, Peter E.
Xu, Jianchu
Promputtha, Itthayakorn
Doilom, Mingkwan
Yang, Jun-Bo
Tang, Alvin M. C.
Karunarathna, Samantha C.
author_sort Tibpromma, Saowaluck
collection PubMed
description Abstract. The authors established the taxonomic status of endophytic fungi associated with leaves of Pandanaceae collected from southern Thailand. Morphotypes were initially identified based on their characteristics in culture and species level identification was done based on both morphological characteristics and phylogenetic analyses of DNA sequence data. Twenty-two isolates from healthy leaves were categorised into eight morphotypes. Appropriate universal primers were used to amplify specific gene regions and phylogenetic analyses were performed to identify these endophytes and established relationships with extant fungi. The authors identified both ascomycete and basidiomycete species, including one new genus, seven new species and nine known species. Morphological descriptions, colour plates and phylogenies are given for each taxon.
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spelling pubmed-62832672018-12-07 Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand Tibpromma, Saowaluck Hyde, Kevin D. Bhat, Jayarama D. Mortimer, Peter E. Xu, Jianchu Promputtha, Itthayakorn Doilom, Mingkwan Yang, Jun-Bo Tang, Alvin M. C. Karunarathna, Samantha C. MycoKeys Research Article Abstract. The authors established the taxonomic status of endophytic fungi associated with leaves of Pandanaceae collected from southern Thailand. Morphotypes were initially identified based on their characteristics in culture and species level identification was done based on both morphological characteristics and phylogenetic analyses of DNA sequence data. Twenty-two isolates from healthy leaves were categorised into eight morphotypes. Appropriate universal primers were used to amplify specific gene regions and phylogenetic analyses were performed to identify these endophytes and established relationships with extant fungi. The authors identified both ascomycete and basidiomycete species, including one new genus, seven new species and nine known species. Morphological descriptions, colour plates and phylogenies are given for each taxon. Pensoft Publishers 2018-03-28 /pmc/articles/PMC6283267/ /pubmed/30532625 http://dx.doi.org/10.3897/mycokeys.33.23670 Text en Saowaluck Tibpromma, Kevin D. Hyde, Jayarama D. Bhat, Peter E. Mortimer, Jianchu Xu, Itthayakorn Promputtha, Mingkwan Doilom, Jun-Bo Yang, Alvin M. C. Tang, Samantha C. Karunarathna http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Tibpromma, Saowaluck
Hyde, Kevin D.
Bhat, Jayarama D.
Mortimer, Peter E.
Xu, Jianchu
Promputtha, Itthayakorn
Doilom, Mingkwan
Yang, Jun-Bo
Tang, Alvin M. C.
Karunarathna, Samantha C.
Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand
title Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand
title_full Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand
title_fullStr Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand
title_full_unstemmed Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand
title_short Identification of endophytic fungi from leaves of Pandanaceae based on their morphotypes and DNA sequence data from southern Thailand
title_sort identification of endophytic fungi from leaves of pandanaceae based on their morphotypes and dna sequence data from southern thailand
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6283267/
https://www.ncbi.nlm.nih.gov/pubmed/30532625
http://dx.doi.org/10.3897/mycokeys.33.23670
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