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DNA as UV light–harvesting antenna
The ordered structure of UV chromophores in DNA resembles photosynthetic light-harvesting complexes in which quantum coherence effects play a major role in highly efficient directional energy transfer. The possible role of coherent excitons in energy transport in DNA remains debated. Meanwhile, ener...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6283424/ https://www.ncbi.nlm.nih.gov/pubmed/29186575 http://dx.doi.org/10.1093/nar/gkx1185 |
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author | Volkov, Ivan L Reveguk, Zakhar V Serdobintsev, Pavel Yu Ramazanov, Ruslan R Kononov, Alexei I |
author_facet | Volkov, Ivan L Reveguk, Zakhar V Serdobintsev, Pavel Yu Ramazanov, Ruslan R Kononov, Alexei I |
author_sort | Volkov, Ivan L |
collection | PubMed |
description | The ordered structure of UV chromophores in DNA resembles photosynthetic light-harvesting complexes in which quantum coherence effects play a major role in highly efficient directional energy transfer. The possible role of coherent excitons in energy transport in DNA remains debated. Meanwhile, energy transport properties are greatly important for understanding the mechanisms of photochemical reactions in cellular DNA and for DNA-based artificial nanostructures. Here, we studied energy transfer in DNA complexes formed with silver nanoclusters and with intercalating dye (acridine orange). Steady-state fluorescence measurements with two DNA templates (15-mer DNA duplex and calf thymus DNA) showed that excitation energy can be transferred to the clusters from 21 and 28 nucleobases, respectively. This differed from the DNA–acridine orange complex for which energy transfer took place from four neighboring bases only. Fluorescence up-conversion measurements showed that the energy transfer took place within [Image: see text] 100 fs. The efficient energy transport in the Ag–DNA complexes suggests an excitonic mechanism for the transfer, such that the excitation is delocalized over at least four and seven stacked bases, respectively, in one strand of the duplexes stabilizing the clusters. This result demonstrates that the exciton delocalization length in some DNA structures may not be limited to just two bases. |
format | Online Article Text |
id | pubmed-6283424 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-62834242018-12-11 DNA as UV light–harvesting antenna Volkov, Ivan L Reveguk, Zakhar V Serdobintsev, Pavel Yu Ramazanov, Ruslan R Kononov, Alexei I Nucleic Acids Res Molecular Biology The ordered structure of UV chromophores in DNA resembles photosynthetic light-harvesting complexes in which quantum coherence effects play a major role in highly efficient directional energy transfer. The possible role of coherent excitons in energy transport in DNA remains debated. Meanwhile, energy transport properties are greatly important for understanding the mechanisms of photochemical reactions in cellular DNA and for DNA-based artificial nanostructures. Here, we studied energy transfer in DNA complexes formed with silver nanoclusters and with intercalating dye (acridine orange). Steady-state fluorescence measurements with two DNA templates (15-mer DNA duplex and calf thymus DNA) showed that excitation energy can be transferred to the clusters from 21 and 28 nucleobases, respectively. This differed from the DNA–acridine orange complex for which energy transfer took place from four neighboring bases only. Fluorescence up-conversion measurements showed that the energy transfer took place within [Image: see text] 100 fs. The efficient energy transport in the Ag–DNA complexes suggests an excitonic mechanism for the transfer, such that the excitation is delocalized over at least four and seven stacked bases, respectively, in one strand of the duplexes stabilizing the clusters. This result demonstrates that the exciton delocalization length in some DNA structures may not be limited to just two bases. Oxford University Press 2018-04-20 2017-11-23 /pmc/articles/PMC6283424/ /pubmed/29186575 http://dx.doi.org/10.1093/nar/gkx1185 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Molecular Biology Volkov, Ivan L Reveguk, Zakhar V Serdobintsev, Pavel Yu Ramazanov, Ruslan R Kononov, Alexei I DNA as UV light–harvesting antenna |
title | DNA as UV light–harvesting antenna |
title_full | DNA as UV light–harvesting antenna |
title_fullStr | DNA as UV light–harvesting antenna |
title_full_unstemmed | DNA as UV light–harvesting antenna |
title_short | DNA as UV light–harvesting antenna |
title_sort | dna as uv light–harvesting antenna |
topic | Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6283424/ https://www.ncbi.nlm.nih.gov/pubmed/29186575 http://dx.doi.org/10.1093/nar/gkx1185 |
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