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Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites
Head and neck cancer (HNC) is a heterogeneous malignant disease with distinct global distribution. Metabolic adaptations of HNC are significantly gaining clinical interests nowadays. Here, we investigated effects of HNC on differential expression of volatile metabolites in human saliva. We applied h...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6286361/ https://www.ncbi.nlm.nih.gov/pubmed/30531924 http://dx.doi.org/10.1038/s41598-018-35854-x |
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author | Taware, Ravindra Taunk, Khushman Pereira, Jorge A. M. Shirolkar, Amey Soneji, Dharmesh Câmara, José S. Nagarajaram, H. A. Rapole, Srikanth |
author_facet | Taware, Ravindra Taunk, Khushman Pereira, Jorge A. M. Shirolkar, Amey Soneji, Dharmesh Câmara, José S. Nagarajaram, H. A. Rapole, Srikanth |
author_sort | Taware, Ravindra |
collection | PubMed |
description | Head and neck cancer (HNC) is a heterogeneous malignant disease with distinct global distribution. Metabolic adaptations of HNC are significantly gaining clinical interests nowadays. Here, we investigated effects of HNC on differential expression of volatile metabolites in human saliva. We applied headspace solid phase microextraction coupled with gas chromatography-mass spectrometry analysis of saliva samples collected from 59 human subjects (HNC − 32, Control − 27). We identified and quantified 48 volatile organic metabolites (VOMs) and observed profound effects of HNC on these metabolites. These effects were VOM specific and significantly differed in the biologically comparable healthy controls. HNC induced changes in salivary VOM composition were well attributed to in vivo metabolic effects. A panel of 15 VOMs with variable importance in projection (VIP) score >1, false discovery rate (FDR) corrected p-value < 0.05 and log(2) fold change (log(2) FC) value of ≥0.58/≤−0.58 were regarded as discriminatory metabolites of pathophysiological importance. Afterwards, receiver operator characteristic curve (ROC) projected certain VOMs viz., 1,4-dichlorobenzene, 1,2-decanediol, 2,5-bis1,1-dimethylethylphenol and E-3-decen-2-ol with profound metabolic effects of HNC and highest class segregation potential. Moreover, metabolic pathways analysis portrayed several dysregulated pathways in HNC, which enhanced our basic understanding on salivary VOM changes. Our observations could redefine several known/already investigated systemic phenomenons (e.g. biochemical pathways). These findings will inspire further research in this direction and may open unconventional avenues for non-invasive monitoring of HNC and its therapy in the future. |
format | Online Article Text |
id | pubmed-6286361 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-62863612018-12-19 Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites Taware, Ravindra Taunk, Khushman Pereira, Jorge A. M. Shirolkar, Amey Soneji, Dharmesh Câmara, José S. Nagarajaram, H. A. Rapole, Srikanth Sci Rep Article Head and neck cancer (HNC) is a heterogeneous malignant disease with distinct global distribution. Metabolic adaptations of HNC are significantly gaining clinical interests nowadays. Here, we investigated effects of HNC on differential expression of volatile metabolites in human saliva. We applied headspace solid phase microextraction coupled with gas chromatography-mass spectrometry analysis of saliva samples collected from 59 human subjects (HNC − 32, Control − 27). We identified and quantified 48 volatile organic metabolites (VOMs) and observed profound effects of HNC on these metabolites. These effects were VOM specific and significantly differed in the biologically comparable healthy controls. HNC induced changes in salivary VOM composition were well attributed to in vivo metabolic effects. A panel of 15 VOMs with variable importance in projection (VIP) score >1, false discovery rate (FDR) corrected p-value < 0.05 and log(2) fold change (log(2) FC) value of ≥0.58/≤−0.58 were regarded as discriminatory metabolites of pathophysiological importance. Afterwards, receiver operator characteristic curve (ROC) projected certain VOMs viz., 1,4-dichlorobenzene, 1,2-decanediol, 2,5-bis1,1-dimethylethylphenol and E-3-decen-2-ol with profound metabolic effects of HNC and highest class segregation potential. Moreover, metabolic pathways analysis portrayed several dysregulated pathways in HNC, which enhanced our basic understanding on salivary VOM changes. Our observations could redefine several known/already investigated systemic phenomenons (e.g. biochemical pathways). These findings will inspire further research in this direction and may open unconventional avenues for non-invasive monitoring of HNC and its therapy in the future. Nature Publishing Group UK 2018-12-07 /pmc/articles/PMC6286361/ /pubmed/30531924 http://dx.doi.org/10.1038/s41598-018-35854-x Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Taware, Ravindra Taunk, Khushman Pereira, Jorge A. M. Shirolkar, Amey Soneji, Dharmesh Câmara, José S. Nagarajaram, H. A. Rapole, Srikanth Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites |
title | Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites |
title_full | Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites |
title_fullStr | Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites |
title_full_unstemmed | Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites |
title_short | Volatilomic insight of head and neck cancer via the effects observed on saliva metabolites |
title_sort | volatilomic insight of head and neck cancer via the effects observed on saliva metabolites |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6286361/ https://www.ncbi.nlm.nih.gov/pubmed/30531924 http://dx.doi.org/10.1038/s41598-018-35854-x |
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