Cargando…
Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma
Now, numerous exciting findings have been yielded in the field of energy metabolism within glioma cells. In addition to aerobic glycolysis, multiple catabolic pathways are employed for energy production. However, the prognostic significance of energy metabolism in glioma remains obscure. Here, we ex...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6286858/ https://www.ncbi.nlm.nih.gov/pubmed/30407923 http://dx.doi.org/10.18632/aging.101625 |
_version_ | 1783379538850349056 |
---|---|
author | Zhou, Zhengui Huang, Ruoyu Chai, Ruichao Zhou, Xiaohong Hu, Zhiping Wang, Wenbiao Chen, Baoguo Deng, Lintao Liu, Yuqing Wu, Fan |
author_facet | Zhou, Zhengui Huang, Ruoyu Chai, Ruichao Zhou, Xiaohong Hu, Zhiping Wang, Wenbiao Chen, Baoguo Deng, Lintao Liu, Yuqing Wu, Fan |
author_sort | Zhou, Zhengui |
collection | PubMed |
description | Now, numerous exciting findings have been yielded in the field of energy metabolism within glioma cells. In addition to aerobic glycolysis, multiple catabolic pathways are employed for energy production. However, the prognostic significance of energy metabolism in glioma remains obscure. Here, we explored the relationship between energy metabolism gene profile and outcome of diffuse glioma patients using The Cancer Genome Altas (TCGA) and Chinese Glioma Genome Altas (CGGA) datasets. Based on the gene expression profile, consensus clustering identified two robust clusters of glioma patients with distinguished prognostic and molecular features. With the Cox proportional hazards model with elastic net penalty, an energy metabolism-related signature was built to evaluate patients’ prognosis. Kaplan-Meier analysis found that the acquired signature could differentiate the outcome of low and high-risk groups of patients in both cohorts. Moreover, the signature, significantly associated with the clinical and molecular features, could serve as an independent prognostic factor for glioma patients. Gene Ontology (GO) and Gene Set Enrichment Analysis (GSEA) showed that gene sets correlated with high-risk group were involved in immune and inflammatory response, with the low-risk group were mainly related to glutamate receptor signaling pathway. Our results provided new insight into energy metabolism role in diffuse glioma. |
format | Online Article Text |
id | pubmed-6286858 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-62868582018-12-17 Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma Zhou, Zhengui Huang, Ruoyu Chai, Ruichao Zhou, Xiaohong Hu, Zhiping Wang, Wenbiao Chen, Baoguo Deng, Lintao Liu, Yuqing Wu, Fan Aging (Albany NY) Research Paper Now, numerous exciting findings have been yielded in the field of energy metabolism within glioma cells. In addition to aerobic glycolysis, multiple catabolic pathways are employed for energy production. However, the prognostic significance of energy metabolism in glioma remains obscure. Here, we explored the relationship between energy metabolism gene profile and outcome of diffuse glioma patients using The Cancer Genome Altas (TCGA) and Chinese Glioma Genome Altas (CGGA) datasets. Based on the gene expression profile, consensus clustering identified two robust clusters of glioma patients with distinguished prognostic and molecular features. With the Cox proportional hazards model with elastic net penalty, an energy metabolism-related signature was built to evaluate patients’ prognosis. Kaplan-Meier analysis found that the acquired signature could differentiate the outcome of low and high-risk groups of patients in both cohorts. Moreover, the signature, significantly associated with the clinical and molecular features, could serve as an independent prognostic factor for glioma patients. Gene Ontology (GO) and Gene Set Enrichment Analysis (GSEA) showed that gene sets correlated with high-risk group were involved in immune and inflammatory response, with the low-risk group were mainly related to glutamate receptor signaling pathway. Our results provided new insight into energy metabolism role in diffuse glioma. Impact Journals 2018-11-08 /pmc/articles/PMC6286858/ /pubmed/30407923 http://dx.doi.org/10.18632/aging.101625 Text en Copyright © 2018 Zhou et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY) 3.0 License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Zhou, Zhengui Huang, Ruoyu Chai, Ruichao Zhou, Xiaohong Hu, Zhiping Wang, Wenbiao Chen, Baoguo Deng, Lintao Liu, Yuqing Wu, Fan Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma |
title | Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma |
title_full | Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma |
title_fullStr | Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma |
title_full_unstemmed | Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma |
title_short | Identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma |
title_sort | identification of an energy metabolism-related signature associated with clinical prognosis in diffuse glioma |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6286858/ https://www.ncbi.nlm.nih.gov/pubmed/30407923 http://dx.doi.org/10.18632/aging.101625 |
work_keys_str_mv | AT zhouzhengui identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT huangruoyu identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT chairuichao identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT zhouxiaohong identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT huzhiping identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT wangwenbiao identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT chenbaoguo identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT denglintao identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT liuyuqing identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma AT wufan identificationofanenergymetabolismrelatedsignatureassociatedwithclinicalprognosisindiffuseglioma |