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Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation

Parasites are key drivers of phytoplankton bloom dynamics and related aquatic ecosystem processes. Yet, the dearth of morphological and molecular information hinders the assessment of their diversity and ecological role. Using single-cell techniques, we characterise morphologically and molecularly,...

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Autores principales: Garvetto, Andrea, Nézan, Elisabeth, Badis, Yacine, Bilien, Gwenael, Arce, Paola, Bresnan, Eileen, Gachon, Claire M. M., Siano, Raffaele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6286980/
https://www.ncbi.nlm.nih.gov/pubmed/30559730
http://dx.doi.org/10.3389/fmicb.2018.02918
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author Garvetto, Andrea
Nézan, Elisabeth
Badis, Yacine
Bilien, Gwenael
Arce, Paola
Bresnan, Eileen
Gachon, Claire M. M.
Siano, Raffaele
author_facet Garvetto, Andrea
Nézan, Elisabeth
Badis, Yacine
Bilien, Gwenael
Arce, Paola
Bresnan, Eileen
Gachon, Claire M. M.
Siano, Raffaele
author_sort Garvetto, Andrea
collection PubMed
description Parasites are key drivers of phytoplankton bloom dynamics and related aquatic ecosystem processes. Yet, the dearth of morphological and molecular information hinders the assessment of their diversity and ecological role. Using single-cell techniques, we characterise morphologically and molecularly, intracellular parasitoids infecting four potentially toxin-producing Pseudo-nitzschia and one Melosira species on the North Atlantic coast. These sequences define two, morphologically indistinguishable clades within the phylum Oomycota, related to the genera of algal parasites Anisolpidium and Olpidiopsis and the diatom parasitoid species Miracula helgolandica. Our morphological data are insufficient to attribute either clade to the still unsequenced genus Ectrogella; hence it is proposed to name the clades OOM_1 and OOM_2. A screening of global databases of the barcode regions V4 and V9 of the 18S rDNA demonstrate the presence of these parasitoids beyond the North Atlantic coastal region. During a biweekly metabarcoding survey (Concarneau Bay, France), reads associated with one sequenced parasitoid coincided with the decline of Cerataulina pelagica bloom, whilst the other parasitoids co-occurred at low abundance with Pseudo-nitzschia. Our data highlight a complex and unexplored diversity of the oomycete parasitoids of diatoms and calls for the investigation of their phenology, evolution, and potential contribution in controlling their host spatial-temporal dynamics.
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spelling pubmed-62869802018-12-17 Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation Garvetto, Andrea Nézan, Elisabeth Badis, Yacine Bilien, Gwenael Arce, Paola Bresnan, Eileen Gachon, Claire M. M. Siano, Raffaele Front Microbiol Microbiology Parasites are key drivers of phytoplankton bloom dynamics and related aquatic ecosystem processes. Yet, the dearth of morphological and molecular information hinders the assessment of their diversity and ecological role. Using single-cell techniques, we characterise morphologically and molecularly, intracellular parasitoids infecting four potentially toxin-producing Pseudo-nitzschia and one Melosira species on the North Atlantic coast. These sequences define two, morphologically indistinguishable clades within the phylum Oomycota, related to the genera of algal parasites Anisolpidium and Olpidiopsis and the diatom parasitoid species Miracula helgolandica. Our morphological data are insufficient to attribute either clade to the still unsequenced genus Ectrogella; hence it is proposed to name the clades OOM_1 and OOM_2. A screening of global databases of the barcode regions V4 and V9 of the 18S rDNA demonstrate the presence of these parasitoids beyond the North Atlantic coastal region. During a biweekly metabarcoding survey (Concarneau Bay, France), reads associated with one sequenced parasitoid coincided with the decline of Cerataulina pelagica bloom, whilst the other parasitoids co-occurred at low abundance with Pseudo-nitzschia. Our data highlight a complex and unexplored diversity of the oomycete parasitoids of diatoms and calls for the investigation of their phenology, evolution, and potential contribution in controlling their host spatial-temporal dynamics. Frontiers Media S.A. 2018-12-03 /pmc/articles/PMC6286980/ /pubmed/30559730 http://dx.doi.org/10.3389/fmicb.2018.02918 Text en Copyright © 2018 Garvetto, Nézan, Badis, Bilien, Arce, Bresnan, Gachon and Siano. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Garvetto, Andrea
Nézan, Elisabeth
Badis, Yacine
Bilien, Gwenael
Arce, Paola
Bresnan, Eileen
Gachon, Claire M. M.
Siano, Raffaele
Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation
title Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation
title_full Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation
title_fullStr Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation
title_full_unstemmed Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation
title_short Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation
title_sort novel widespread marine oomycetes parasitising diatoms, including the toxic genus pseudo-nitzschia: genetic, morphological, and ecological characterisation
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6286980/
https://www.ncbi.nlm.nih.gov/pubmed/30559730
http://dx.doi.org/10.3389/fmicb.2018.02918
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