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Building a local community of practice in scientific programming for life scientists
In this paper, we describe why and how to build a local community of practice in scientific programming for life scientists who use computers and programming in their research. A community of practice is a small group of scientists who meet regularly to help each other and promote good practices in...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6287879/ https://www.ncbi.nlm.nih.gov/pubmed/30485260 http://dx.doi.org/10.1371/journal.pbio.2005561 |
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author | Stevens, Sarah L. R. Kuzak, Mateusz Martinez, Carlos Moser, Aurelia Bleeker, Petra Galland, Marc |
author_facet | Stevens, Sarah L. R. Kuzak, Mateusz Martinez, Carlos Moser, Aurelia Bleeker, Petra Galland, Marc |
author_sort | Stevens, Sarah L. R. |
collection | PubMed |
description | In this paper, we describe why and how to build a local community of practice in scientific programming for life scientists who use computers and programming in their research. A community of practice is a small group of scientists who meet regularly to help each other and promote good practices in scientific programming. While most life scientists are well trained in the laboratory to conduct experiments, good practices with (big) data sets and their analysis are often missing. We propose a model on how to build such a community of practice at a local academic institution, present two real-life examples, and introduce challenges and implemented solutions. We believe that the current data deluge that life scientists face can benefit from the implementation of these small communities. Good practices spread among experimental scientists will foster open, transparent, and sound scientific results beneficial to society. |
format | Online Article Text |
id | pubmed-6287879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-62878792018-12-28 Building a local community of practice in scientific programming for life scientists Stevens, Sarah L. R. Kuzak, Mateusz Martinez, Carlos Moser, Aurelia Bleeker, Petra Galland, Marc PLoS Biol Community Page In this paper, we describe why and how to build a local community of practice in scientific programming for life scientists who use computers and programming in their research. A community of practice is a small group of scientists who meet regularly to help each other and promote good practices in scientific programming. While most life scientists are well trained in the laboratory to conduct experiments, good practices with (big) data sets and their analysis are often missing. We propose a model on how to build such a community of practice at a local academic institution, present two real-life examples, and introduce challenges and implemented solutions. We believe that the current data deluge that life scientists face can benefit from the implementation of these small communities. Good practices spread among experimental scientists will foster open, transparent, and sound scientific results beneficial to society. Public Library of Science 2018-11-28 /pmc/articles/PMC6287879/ /pubmed/30485260 http://dx.doi.org/10.1371/journal.pbio.2005561 Text en © 2018 Stevens et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Community Page Stevens, Sarah L. R. Kuzak, Mateusz Martinez, Carlos Moser, Aurelia Bleeker, Petra Galland, Marc Building a local community of practice in scientific programming for life scientists |
title | Building a local community of practice in scientific programming for life scientists |
title_full | Building a local community of practice in scientific programming for life scientists |
title_fullStr | Building a local community of practice in scientific programming for life scientists |
title_full_unstemmed | Building a local community of practice in scientific programming for life scientists |
title_short | Building a local community of practice in scientific programming for life scientists |
title_sort | building a local community of practice in scientific programming for life scientists |
topic | Community Page |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6287879/ https://www.ncbi.nlm.nih.gov/pubmed/30485260 http://dx.doi.org/10.1371/journal.pbio.2005561 |
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