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Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic

Here we present the morphological and physiological properties of isolated Lysinibacillus fusiformis strain GM, its draft genome sequence as well as annotation and analysis of its genome. Initial analysis of MALDI-TOF mass spectrometry, 16S rRNA gene analysis and in silico DNA-DNA hybridization reve...

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Autores principales: Pudova, Daria S., Lutfullin, Marat T., Shagimardanova, Elena I., Hadieva, Guzel F., Shigapova, Leyla, Toymentseva, Anna A., Kabanov, Daniil A., Mardanova, Ayslu M., Vologin, Semen G., Sharipova, Margarita R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288392/
https://www.ncbi.nlm.nih.gov/pubmed/30761330
http://dx.doi.org/10.1016/j.dib.2018.11.107
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author Pudova, Daria S.
Lutfullin, Marat T.
Shagimardanova, Elena I.
Hadieva, Guzel F.
Shigapova, Leyla
Toymentseva, Anna A.
Kabanov, Daniil A.
Mardanova, Ayslu M.
Vologin, Semen G.
Sharipova, Margarita R.
author_facet Pudova, Daria S.
Lutfullin, Marat T.
Shagimardanova, Elena I.
Hadieva, Guzel F.
Shigapova, Leyla
Toymentseva, Anna A.
Kabanov, Daniil A.
Mardanova, Ayslu M.
Vologin, Semen G.
Sharipova, Margarita R.
author_sort Pudova, Daria S.
collection PubMed
description Here we present the morphological and physiological properties of isolated Lysinibacillus fusiformis strain GM, its draft genome sequence as well as annotation and analysis of its genome. Initial analysis of MALDI-TOF mass spectrometry, 16S rRNA gene analysis and in silico DNA-DNA hybridization revealed that the strain belongs to the species Lysinibacillus fusiformis. The 4,678,122 bp draft genome consist of 17 scaffolds encoding 4588 proteins and 137 RNAs. Annotation of the genome sequence revealed cellulase and protease encoding genes, genes of adhesion proteins and putative genes responsible for the biosynthesis of antimicrobial metabolites. The Whole Genome Shotgun project has been deposited at DDBJ/EMBL/GenBank under the accession number NTMQ00000000.1 (https://www.ncbi.nlm.nih.gov/nuccore/NZ_NTMQ00000000.1).
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spelling pubmed-62883922019-02-13 Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic Pudova, Daria S. Lutfullin, Marat T. Shagimardanova, Elena I. Hadieva, Guzel F. Shigapova, Leyla Toymentseva, Anna A. Kabanov, Daniil A. Mardanova, Ayslu M. Vologin, Semen G. Sharipova, Margarita R. Data Brief Genetics, Genomics and Molecular Biology Here we present the morphological and physiological properties of isolated Lysinibacillus fusiformis strain GM, its draft genome sequence as well as annotation and analysis of its genome. Initial analysis of MALDI-TOF mass spectrometry, 16S rRNA gene analysis and in silico DNA-DNA hybridization revealed that the strain belongs to the species Lysinibacillus fusiformis. The 4,678,122 bp draft genome consist of 17 scaffolds encoding 4588 proteins and 137 RNAs. Annotation of the genome sequence revealed cellulase and protease encoding genes, genes of adhesion proteins and putative genes responsible for the biosynthesis of antimicrobial metabolites. The Whole Genome Shotgun project has been deposited at DDBJ/EMBL/GenBank under the accession number NTMQ00000000.1 (https://www.ncbi.nlm.nih.gov/nuccore/NZ_NTMQ00000000.1). Elsevier 2018-11-24 /pmc/articles/PMC6288392/ /pubmed/30761330 http://dx.doi.org/10.1016/j.dib.2018.11.107 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Genetics, Genomics and Molecular Biology
Pudova, Daria S.
Lutfullin, Marat T.
Shagimardanova, Elena I.
Hadieva, Guzel F.
Shigapova, Leyla
Toymentseva, Anna A.
Kabanov, Daniil A.
Mardanova, Ayslu M.
Vologin, Semen G.
Sharipova, Margarita R.
Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic
title Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic
title_full Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic
title_fullStr Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic
title_full_unstemmed Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic
title_short Draft genome sequence data of Lysinibacillus fusiformis strain GM, isolated from potato phyllosphere as a potential probiotic
title_sort draft genome sequence data of lysinibacillus fusiformis strain gm, isolated from potato phyllosphere as a potential probiotic
topic Genetics, Genomics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288392/
https://www.ncbi.nlm.nih.gov/pubmed/30761330
http://dx.doi.org/10.1016/j.dib.2018.11.107
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