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Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion
Floral reversion is a process in which differentiated floral organs revert back to vegetative organs. Although this phenomenon has been described for decades, the underlying molecular mechanisms remain unclear. In this study, we found that immature switchgrass (Panicum virgatum) inflorescences can r...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288819/ https://www.ncbi.nlm.nih.gov/pubmed/30564266 http://dx.doi.org/10.3389/fpls.2018.01805 |
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author | Yongfeng, Wang Aiquan, Zheng Fengli, Sun Mao, Li Kaijie, Xu Chao, Zhang Shudong, Liu Yajun, Xi |
author_facet | Yongfeng, Wang Aiquan, Zheng Fengli, Sun Mao, Li Kaijie, Xu Chao, Zhang Shudong, Liu Yajun, Xi |
author_sort | Yongfeng, Wang |
collection | PubMed |
description | Floral reversion is a process in which differentiated floral organs revert back to vegetative organs. Although this phenomenon has been described for decades, the underlying molecular mechanisms remain unclear. In this study, we found that immature switchgrass (Panicum virgatum) inflorescences can revert to neonatal shoots when incubated on a basal medium with benzylaminopurine. We used anatomical and histological methods to verify that these shoots were formed from floret primordia through flower reversion. To further explore the gene regulation of floral reversion in switchgrass, the transcriptome of reversed, unreversed, and uncultured immature inflorescences were analyzed and 517 genes were identified as participating in flower reversion. Annotation using non-redundant databases revealed that these genes are involved in plant hormone biosynthesis and signal transduction, starch and sucrose metabolism, DNA replication and modification, and other processes crucial for switchgrass flower reversion. When four of the genes were overexpressed in Arabidopsis thaliana, vegetative growth was facilitated and reproductive growth was inhibited in transgenic plants. This study provides a basic understanding of genes regulating the floral transition in switchgrass and will promote the research of floral reversion and flower maintenance. |
format | Online Article Text |
id | pubmed-6288819 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-62888192018-12-18 Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion Yongfeng, Wang Aiquan, Zheng Fengli, Sun Mao, Li Kaijie, Xu Chao, Zhang Shudong, Liu Yajun, Xi Front Plant Sci Plant Science Floral reversion is a process in which differentiated floral organs revert back to vegetative organs. Although this phenomenon has been described for decades, the underlying molecular mechanisms remain unclear. In this study, we found that immature switchgrass (Panicum virgatum) inflorescences can revert to neonatal shoots when incubated on a basal medium with benzylaminopurine. We used anatomical and histological methods to verify that these shoots were formed from floret primordia through flower reversion. To further explore the gene regulation of floral reversion in switchgrass, the transcriptome of reversed, unreversed, and uncultured immature inflorescences were analyzed and 517 genes were identified as participating in flower reversion. Annotation using non-redundant databases revealed that these genes are involved in plant hormone biosynthesis and signal transduction, starch and sucrose metabolism, DNA replication and modification, and other processes crucial for switchgrass flower reversion. When four of the genes were overexpressed in Arabidopsis thaliana, vegetative growth was facilitated and reproductive growth was inhibited in transgenic plants. This study provides a basic understanding of genes regulating the floral transition in switchgrass and will promote the research of floral reversion and flower maintenance. Frontiers Media S.A. 2018-12-04 /pmc/articles/PMC6288819/ /pubmed/30564266 http://dx.doi.org/10.3389/fpls.2018.01805 Text en Copyright © 2018 Yongfeng, Aiquan, Fengli, Mao, Kaijie, Chao, Shudong and Yajun. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Yongfeng, Wang Aiquan, Zheng Fengli, Sun Mao, Li Kaijie, Xu Chao, Zhang Shudong, Liu Yajun, Xi Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion |
title | Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion |
title_full | Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion |
title_fullStr | Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion |
title_full_unstemmed | Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion |
title_short | Using Transcriptome Analysis to Identify Genes Involved in Switchgrass Flower Reversion |
title_sort | using transcriptome analysis to identify genes involved in switchgrass flower reversion |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288819/ https://www.ncbi.nlm.nih.gov/pubmed/30564266 http://dx.doi.org/10.3389/fpls.2018.01805 |
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