Cargando…

CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes

BACKGROUND: Hot spring bacteria have unique biological adaptations to survive the extreme conditions of these environments; these bacteria produce thermostable enzymes that can be used in biotechnological and industrial applications. However, sequencing these bacteria is complex, since it is not pos...

Descripción completa

Detalles Bibliográficos
Autores principales:	Benavides, Andres, Isaza, Juan Pablo, Niño-García, Juan Pablo, Alzate, Juan Fernando, Cabarcas, Felipe
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288851/ https://www.ncbi.nlm.nih.gov/pubmed/30537931 http://dx.doi.org/10.1186/s12864-018-5191-y

Ejemplares similares

Differential determinants of virulence in two Mycobacterium tuberculosis Colombian clinical isolates of the LAM09 family
por: Baena, Andres, et al.
Publicado: (2019)

DATMA: Distributed AuTomatic Metagenomic Assembly and annotation framework
por: Benavides, Andres, et al.
Publicado: (2020)

De sa prison, Adlène H. clame son innocence
por: Guiraud, Laurent
Publicado: (2010)

2nd Colombian Congress on Computational Biology and Bioinformatics
por: Castillo, Luis, et al.
Publicado: (2014)

One-year mortality after hip fracture surgery: urban–rural differences in the Colombian Andes
por: Duque-Sánchez, Juan-Daniel, et al.
Publicado: (2022)

The High-Elevation Peatlands of the Northern Andes, Colombia
por: Benavides, Juan C., et al.
Publicado: (2023)

Metagenomic Analysis of Biocide-Treated Neotropical Oil Reservoir Water Unveils Microdiversity of Thermophile Tepidiphilus
por: Bedoya, Katherine, et al.
Publicado: (2021)

Large genomic deletions delineate Mycobacterium tuberculosis L4 sublineages in South American countries
por: Baena, Andres, et al.
Publicado: (2023)

Draft genome sequence of Pseudomonas extremaustralis strain USBA-GBX 515 isolated from Superparamo soil samples in Colombian Andes
por: López, Gina, et al.
Publicado: (2017)

The DNA history of a lonely oak: Quercus humboldtii phylogeography in the Colombian Andes
por: Zorrilla‐Azcué, Sofía, et al.
Publicado: (2021)

Glossolomamagenticristatum (Gesneriaceae), a new species from the Cordillera Oriental of the Colombian Andes
por: Hoyos, David, et al.
Publicado: (2023)

Phenotype-genotype analysis of CYP2C19 in Colombian mestizo individuals
por: Isaza, Carlos, et al.
Publicado: (2007)

Datasets of the environmental factors and management practices of the smallholder tomato production systems in the Colombian Andes
por: Gil, R., et al.
Publicado: (2019)

BinAligner: a heuristic method to align biological networks
por: Yang, Jialiang, et al.
Publicado: (2013)

Species composition of arbuscular mycorrhizal communities changes with elevation in the Andes of South Ecuador
por: Haug, Ingeborg, et al.
Publicado: (2019)

Factors shaping the gut bacterial community assembly in two main Colombian malaria vectors
por: Bascuñán, Priscila, et al.
Publicado: (2018)

The Tracking of Moist Habitats Allowed Aiphanes (Arecaceae) to Cover the Elevation Gradient of the Northern Andes
por: Sanín, María José, et al.
Publicado: (2022)

Ethnobotany of the Sierra Nevada del Cocuy-Güicán: climate change and conservation strategies in the Colombian Andes
por: Rodríguez, Mireia Alcántara, et al.
Publicado: (2018)

A co-designed curriculum for cultural safety training of Colombian health professionals: sequential-consensual qualitative study
por: Pimentel, Juan, et al.
Publicado: (2022)

The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae
por: Pieretti, Isabelle, et al.
Publicado: (2009)

Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae
por: Assis, Renata de A. B., et al.
Publicado: (2017)

XAC4296 Is a Multifunctional and Exclusive Xanthomonadaceae Gene Containing a Fusion of Lytic Transglycosylase and Epimerase Domains
por: de Oliveira, Amanda C. P., et al.
Publicado: (2022)

Reads Binning Improves Alignment-Free Metagenome Comparison
por: Song, Kai, et al.
Publicado: (2019)

LHCb Detector Description and Alignment
por: Palacios, Juan P
Publicado: (2006)

The role of Colombian psychiatrists in the midst of the COVID-19 pandemic()
por: Cano, Juan Fernando, et al.
Publicado: (2021)

Resource Utilization and Environmental and Spatio-Temporal Overlap of a Hilltopping Lycaenid Butterfly Community in the Colombian Andes
por: Prieto, Carlos, et al.
Publicado: (2009)

Structural and Functional Insights from the Metagenome of an Acidic Hot Spring Microbial Planktonic Community in the Colombian Andes
por: Jiménez, Diego Javier, et al.
Publicado: (2012)

Validity and reliability of the Short Physical Performance Battery (SPPB): a pilot study on mobility in the Colombian Andes.
por: Gómez, José Fernando, et al.
Publicado: (2013)

Description and phylogeny of three new species of Synophis (Colubridae, Dipsadinae) from the tropical Andes in Ecuador and Peru
por: Torres-Carvajal, Omar, et al.
Publicado: (2015)

Effect of altitude on wing metric variation of Aedes aegypti (Diptera: Culicidae) in a region of the Colombian Central Andes
por: Leyton Ramos, Luis Míguel, et al.
Publicado: (2020)

Fragmentation of Andes-to-Amazon connectivity by hydropower dams
por: Anderson, Elizabeth P., et al.
Publicado: (2018)

Contrasting microbiota profiles observed in children carrying either Blastocystis spp. or the commensal amoebas Entamoeba coli or Endolimax nana
por: Alzate, Juan F., et al.
Publicado: (2020)

S10.1d Molecular diagnosis and antifungal susceptibility of Colombian clinical isolates of the Sporothrix spp complex
por: Cifuentes, Erika Sánchez, et al.
Publicado: (2022)

Complete mitochondrial genome of the Andean morphotype of Anastrepha fraterculus (Wiedemann) (Diptera: Tephritidae)
por: Isaza, Juan P., et al.
Publicado: (2017)

Mosquito species (Diptera, Culicidae) in three ecosystems from the Colombian Andes: identification through DNA barcoding and adult morphology
por: Rozo-Lopez, Paula, et al.
Publicado: (2015)

Species richness under a vertebral stripe: integrative taxonomy uncovers three additional species of Pholidobolus lizards (Sauria, Squamata, Gymnophthalmidae) from the north-western Colombian Andes
por: Amézquita, Adolfo, et al.
Publicado: (2023)

Andes
por: Vargas Llosa, Mario, 1936-
Publicado: (2001)

Lower methane emissions were associated with higher abundance of ruminal Prevotella in a cohort of Colombian buffalos
por: Aguilar-Marin, Sandra Bibiana, et al.
Publicado: (2020)

Person-to-Person Transmission of Andes Virus
por: Martinez, Valeria P., et al.
Publicado: (2005)

Whole-Genome Sequencing of Xanthomonadaceae Strain Alg18-2.2, Isolated from the Saline Lake Gudzhirganskoe in the Republic of Buryatia, Russia
por: Karlyshev, Andrey V., et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_8bq0pmt7qf0mp1gb79tjsfr7l9