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Atomic structure of boron resolved using machine learning and global sampling
Boron crystals, despite their simple composition, must rank top for complexity: even the atomic structure of the ground state of β-B remains uncertain after 60 years’ study. This makes it difficult to understand the many exotic photoelectric properties of boron. The presence of self-doping atoms in...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289100/ https://www.ncbi.nlm.nih.gov/pubmed/30627388 http://dx.doi.org/10.1039/c8sc03427c |
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author | Huang, Si-Da Shang, Cheng Kang, Pei-Lin Liu, Zhi-Pan |
author_facet | Huang, Si-Da Shang, Cheng Kang, Pei-Lin Liu, Zhi-Pan |
author_sort | Huang, Si-Da |
collection | PubMed |
description | Boron crystals, despite their simple composition, must rank top for complexity: even the atomic structure of the ground state of β-B remains uncertain after 60 years’ study. This makes it difficult to understand the many exotic photoelectric properties of boron. The presence of self-doping atoms in the crystal interstitial sites forms an astronomical configurational space, making the determination of the real configuration virtually impossible using current techniques. Here, by combining machine learning with the latest stochastic surface walking (SSW) global optimization, we explore for the first time the potential energy surface of β-B, revealing 15 293 distinct configurations out of the 2 × 10(5) minima visited, and reveal the key rules governing the filling of the interstitial sites. This advance is only allowed by the construction of an accurate and efficient neural network (NN) potential using a new series of structural descriptors that can sensitively discriminate the complex boron bonding environment. We show that, in contrast to the conventional views on the numerous energy-degenerate configurations, only 40 minima of β-B are identified to be within 7 meV per atom in energy above the global minimum of β-B, most of them having been discovered for the first time. These low energy structures are classified into three types of skeletons and six patterns of doping configurations, with a clear preference for a few characteristic interstitial sites. The observed β-B and its properties are influenced strongly by a particular doping site, the B19 site that neighbors the B18 site, which has an exceptionally large vibrational entropy. The configuration with this B19 occupancy, which ranks only 15(th) at 0 K, turns out to be dominant at high temperatures. Our results highlight the novel SSW-NN architecture as the leading problem solver for complex material phenomena, which would then expedite substantially the building of a material genome database. |
format | Online Article Text |
id | pubmed-6289100 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-62891002019-01-09 Atomic structure of boron resolved using machine learning and global sampling Huang, Si-Da Shang, Cheng Kang, Pei-Lin Liu, Zhi-Pan Chem Sci Chemistry Boron crystals, despite their simple composition, must rank top for complexity: even the atomic structure of the ground state of β-B remains uncertain after 60 years’ study. This makes it difficult to understand the many exotic photoelectric properties of boron. The presence of self-doping atoms in the crystal interstitial sites forms an astronomical configurational space, making the determination of the real configuration virtually impossible using current techniques. Here, by combining machine learning with the latest stochastic surface walking (SSW) global optimization, we explore for the first time the potential energy surface of β-B, revealing 15 293 distinct configurations out of the 2 × 10(5) minima visited, and reveal the key rules governing the filling of the interstitial sites. This advance is only allowed by the construction of an accurate and efficient neural network (NN) potential using a new series of structural descriptors that can sensitively discriminate the complex boron bonding environment. We show that, in contrast to the conventional views on the numerous energy-degenerate configurations, only 40 minima of β-B are identified to be within 7 meV per atom in energy above the global minimum of β-B, most of them having been discovered for the first time. These low energy structures are classified into three types of skeletons and six patterns of doping configurations, with a clear preference for a few characteristic interstitial sites. The observed β-B and its properties are influenced strongly by a particular doping site, the B19 site that neighbors the B18 site, which has an exceptionally large vibrational entropy. The configuration with this B19 occupancy, which ranks only 15(th) at 0 K, turns out to be dominant at high temperatures. Our results highlight the novel SSW-NN architecture as the leading problem solver for complex material phenomena, which would then expedite substantially the building of a material genome database. Royal Society of Chemistry 2018-09-11 /pmc/articles/PMC6289100/ /pubmed/30627388 http://dx.doi.org/10.1039/c8sc03427c Text en This journal is © The Royal Society of Chemistry 2018 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0) |
spellingShingle | Chemistry Huang, Si-Da Shang, Cheng Kang, Pei-Lin Liu, Zhi-Pan Atomic structure of boron resolved using machine learning and global sampling |
title | Atomic structure of boron resolved using machine learning and global sampling
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title_full | Atomic structure of boron resolved using machine learning and global sampling
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title_fullStr | Atomic structure of boron resolved using machine learning and global sampling
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title_full_unstemmed | Atomic structure of boron resolved using machine learning and global sampling
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title_short | Atomic structure of boron resolved using machine learning and global sampling
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title_sort | atomic structure of boron resolved using machine learning and global sampling |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289100/ https://www.ncbi.nlm.nih.gov/pubmed/30627388 http://dx.doi.org/10.1039/c8sc03427c |
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