Cargando…

Atomic structure of boron resolved using machine learning and global sampling

Boron crystals, despite their simple composition, must rank top for complexity: even the atomic structure of the ground state of β-B remains uncertain after 60 years’ study. This makes it difficult to understand the many exotic photoelectric properties of boron. The presence of self-doping atoms in...

Descripción completa

Detalles Bibliográficos
Autores principales: Huang, Si-Da, Shang, Cheng, Kang, Pei-Lin, Liu, Zhi-Pan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289100/
https://www.ncbi.nlm.nih.gov/pubmed/30627388
http://dx.doi.org/10.1039/c8sc03427c
_version_ 1783379921591074816
author Huang, Si-Da
Shang, Cheng
Kang, Pei-Lin
Liu, Zhi-Pan
author_facet Huang, Si-Da
Shang, Cheng
Kang, Pei-Lin
Liu, Zhi-Pan
author_sort Huang, Si-Da
collection PubMed
description Boron crystals, despite their simple composition, must rank top for complexity: even the atomic structure of the ground state of β-B remains uncertain after 60 years’ study. This makes it difficult to understand the many exotic photoelectric properties of boron. The presence of self-doping atoms in the crystal interstitial sites forms an astronomical configurational space, making the determination of the real configuration virtually impossible using current techniques. Here, by combining machine learning with the latest stochastic surface walking (SSW) global optimization, we explore for the first time the potential energy surface of β-B, revealing 15 293 distinct configurations out of the 2 × 10(5) minima visited, and reveal the key rules governing the filling of the interstitial sites. This advance is only allowed by the construction of an accurate and efficient neural network (NN) potential using a new series of structural descriptors that can sensitively discriminate the complex boron bonding environment. We show that, in contrast to the conventional views on the numerous energy-degenerate configurations, only 40 minima of β-B are identified to be within 7 meV per atom in energy above the global minimum of β-B, most of them having been discovered for the first time. These low energy structures are classified into three types of skeletons and six patterns of doping configurations, with a clear preference for a few characteristic interstitial sites. The observed β-B and its properties are influenced strongly by a particular doping site, the B19 site that neighbors the B18 site, which has an exceptionally large vibrational entropy. The configuration with this B19 occupancy, which ranks only 15(th) at 0 K, turns out to be dominant at high temperatures. Our results highlight the novel SSW-NN architecture as the leading problem solver for complex material phenomena, which would then expedite substantially the building of a material genome database.
format Online
Article
Text
id pubmed-6289100
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Royal Society of Chemistry
record_format MEDLINE/PubMed
spelling pubmed-62891002019-01-09 Atomic structure of boron resolved using machine learning and global sampling Huang, Si-Da Shang, Cheng Kang, Pei-Lin Liu, Zhi-Pan Chem Sci Chemistry Boron crystals, despite their simple composition, must rank top for complexity: even the atomic structure of the ground state of β-B remains uncertain after 60 years’ study. This makes it difficult to understand the many exotic photoelectric properties of boron. The presence of self-doping atoms in the crystal interstitial sites forms an astronomical configurational space, making the determination of the real configuration virtually impossible using current techniques. Here, by combining machine learning with the latest stochastic surface walking (SSW) global optimization, we explore for the first time the potential energy surface of β-B, revealing 15 293 distinct configurations out of the 2 × 10(5) minima visited, and reveal the key rules governing the filling of the interstitial sites. This advance is only allowed by the construction of an accurate and efficient neural network (NN) potential using a new series of structural descriptors that can sensitively discriminate the complex boron bonding environment. We show that, in contrast to the conventional views on the numerous energy-degenerate configurations, only 40 minima of β-B are identified to be within 7 meV per atom in energy above the global minimum of β-B, most of them having been discovered for the first time. These low energy structures are classified into three types of skeletons and six patterns of doping configurations, with a clear preference for a few characteristic interstitial sites. The observed β-B and its properties are influenced strongly by a particular doping site, the B19 site that neighbors the B18 site, which has an exceptionally large vibrational entropy. The configuration with this B19 occupancy, which ranks only 15(th) at 0 K, turns out to be dominant at high temperatures. Our results highlight the novel SSW-NN architecture as the leading problem solver for complex material phenomena, which would then expedite substantially the building of a material genome database. Royal Society of Chemistry 2018-09-11 /pmc/articles/PMC6289100/ /pubmed/30627388 http://dx.doi.org/10.1039/c8sc03427c Text en This journal is © The Royal Society of Chemistry 2018 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0)
spellingShingle Chemistry
Huang, Si-Da
Shang, Cheng
Kang, Pei-Lin
Liu, Zhi-Pan
Atomic structure of boron resolved using machine learning and global sampling
title Atomic structure of boron resolved using machine learning and global sampling
title_full Atomic structure of boron resolved using machine learning and global sampling
title_fullStr Atomic structure of boron resolved using machine learning and global sampling
title_full_unstemmed Atomic structure of boron resolved using machine learning and global sampling
title_short Atomic structure of boron resolved using machine learning and global sampling
title_sort atomic structure of boron resolved using machine learning and global sampling
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289100/
https://www.ncbi.nlm.nih.gov/pubmed/30627388
http://dx.doi.org/10.1039/c8sc03427c
work_keys_str_mv AT huangsida atomicstructureofboronresolvedusingmachinelearningandglobalsampling
AT shangcheng atomicstructureofboronresolvedusingmachinelearningandglobalsampling
AT kangpeilin atomicstructureofboronresolvedusingmachinelearningandglobalsampling
AT liuzhipan atomicstructureofboronresolvedusingmachinelearningandglobalsampling