Cargando…
pyseer: a comprehensive tool for microbial pangenome-wide association studies
SUMMARY: Genome-wide association studies (GWAS) in microbes have different challenges to GWAS in eukaryotes. These have been addressed by a number of different methods. pyseer brings these techniques together in one package tailored to microbial GWAS, allows greater flexibility of the input data use...
Autores principales: | Lees, John A, Galardini, Marco, Bentley, Stephen D, Weiser, Jeffrey N, Corander, Jukka |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289128/ https://www.ncbi.nlm.nih.gov/pubmed/30535304 http://dx.doi.org/10.1093/bioinformatics/bty539 |
Ejemplares similares
-
Improved Prediction of Bacterial Genotype-Phenotype Associations Using Interpretable Pangenome-Spanning Regressions
por: Lees, John A., et al.
Publicado: (2020) -
gplas: a comprehensive tool for plasmid analysis using short-read graphs
por: Arredondo-Alonso, Sergio, et al.
Publicado: (2020) -
PanCGHweb: a web tool for genotype calling in pangenome CGH data
por: Bayjanov, Jumamurat R., et al.
Publicado: (2010) -
PanViz: interactive visualization of the structure of functionally annotated pangenomes
por: Pedersen, Thomas Lin, et al.
Publicado: (2017) -
Panache: a web browser-based viewer for linearized pangenomes
por: Durant, Éloi, et al.
Publicado: (2021)