iS-CellR: a user-friendly tool for analyzing and visualizing single-cell RNA sequencing data

SUMMARY: Interactive platform for single-cell RNA-sequencing (iS-CellR) is a web-based Shiny application that is designed to provide user-friendly, comprehensive analysis of single-cell RNA sequencing data. iS-CellR has the capability to run on any modern web browser and provides an accessible graph...

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Detalles Bibliográficos
Autor principal: Patel, Mitulkumar V
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289135/
https://www.ncbi.nlm.nih.gov/pubmed/29982379
http://dx.doi.org/10.1093/bioinformatics/bty517
Descripción
Sumario:SUMMARY: Interactive platform for single-cell RNA-sequencing (iS-CellR) is a web-based Shiny application that is designed to provide user-friendly, comprehensive analysis of single-cell RNA sequencing data. iS-CellR has the capability to run on any modern web browser and provides an accessible graphical user interface that enables the user to perform complex single-cell RNA-sequencing analysis without requiring programming skills. AVAILABILITY AND IMPLEMENTATION: iS-CellR is open source and available through GitHub at https://github.com/immcore/iS-CellR. iS-CellR is implemented in Docker and can be launched on any operating system with Docker installed. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.

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