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The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power
Species reproduction is an important determinant of population dynamics. As such, this is an important parameter in environmental risk assessment. The closure principle computational approach test (CPCAT) was recently proposed as a method to derive a NOEC/LOEC for reproduction count data such as the...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6290723/ https://www.ncbi.nlm.nih.gov/pubmed/30596000 http://dx.doi.org/10.1186/s12302-018-0178-5 |
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author | Lehmann, René Bachmann, Jean Karaoglan, Bilgin Lacker, Jens Lurman, Glenn Polleichtner, Christian Ratte, Hans Toni Ratte, Monika |
author_facet | Lehmann, René Bachmann, Jean Karaoglan, Bilgin Lacker, Jens Lurman, Glenn Polleichtner, Christian Ratte, Hans Toni Ratte, Monika |
author_sort | Lehmann, René |
collection | PubMed |
description | Species reproduction is an important determinant of population dynamics. As such, this is an important parameter in environmental risk assessment. The closure principle computational approach test (CPCAT) was recently proposed as a method to derive a NOEC/LOEC for reproduction count data such as the number of juvenile Daphnia. The Poisson distribution used by CPCAT can be too restrictive as a model of the data-generating process. In practice, the generalized Poisson distribution could be more appropriate, as it allows for inequality of the population mean [Formula: see text] and the population variance [Formula: see text] . It is of fundamental interest to explore the statistical power of CPCAT and the probability of determining a regulatory relevant effect correctly. Using a simulation, we varied between Poisson distribution ([Formula: see text] ) and generalized Poisson distribution allowing for over-dispersion ([Formula: see text] ) and under-dispersion ([Formula: see text] ). The results indicated that the probability of detecting the LOEC/NOEC correctly was [Formula: see text] provided the effect was at least 20% above or below the mean level of the control group and mean reproduction of the control was at least 50 individuals while over-dispersion was missing. Specifically, under-dispersion increased, whereas over-dispersion reduced the statistical power of the CPCAT. Using the well-known Hampel identifier, we propose a simple and straight forward method to assess whether the data-generating process of real data could be over- or under-dispersed. |
format | Online Article Text |
id | pubmed-6290723 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-62907232018-12-27 The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power Lehmann, René Bachmann, Jean Karaoglan, Bilgin Lacker, Jens Lurman, Glenn Polleichtner, Christian Ratte, Hans Toni Ratte, Monika Environ Sci Eur Research Species reproduction is an important determinant of population dynamics. As such, this is an important parameter in environmental risk assessment. The closure principle computational approach test (CPCAT) was recently proposed as a method to derive a NOEC/LOEC for reproduction count data such as the number of juvenile Daphnia. The Poisson distribution used by CPCAT can be too restrictive as a model of the data-generating process. In practice, the generalized Poisson distribution could be more appropriate, as it allows for inequality of the population mean [Formula: see text] and the population variance [Formula: see text] . It is of fundamental interest to explore the statistical power of CPCAT and the probability of determining a regulatory relevant effect correctly. Using a simulation, we varied between Poisson distribution ([Formula: see text] ) and generalized Poisson distribution allowing for over-dispersion ([Formula: see text] ) and under-dispersion ([Formula: see text] ). The results indicated that the probability of detecting the LOEC/NOEC correctly was [Formula: see text] provided the effect was at least 20% above or below the mean level of the control group and mean reproduction of the control was at least 50 individuals while over-dispersion was missing. Specifically, under-dispersion increased, whereas over-dispersion reduced the statistical power of the CPCAT. Using the well-known Hampel identifier, we propose a simple and straight forward method to assess whether the data-generating process of real data could be over- or under-dispersed. Springer Berlin Heidelberg 2018-12-11 2018 /pmc/articles/PMC6290723/ /pubmed/30596000 http://dx.doi.org/10.1186/s12302-018-0178-5 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Research Lehmann, René Bachmann, Jean Karaoglan, Bilgin Lacker, Jens Lurman, Glenn Polleichtner, Christian Ratte, Hans Toni Ratte, Monika The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title | The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_full | The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_fullStr | The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_full_unstemmed | The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_short | The CPCAT as a novel tool to overcome the shortcomings of NOEC/LOEC statistics in ecotoxicology: a simulation study to evaluate the statistical power |
title_sort | cpcat as a novel tool to overcome the shortcomings of noec/loec statistics in ecotoxicology: a simulation study to evaluate the statistical power |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6290723/ https://www.ncbi.nlm.nih.gov/pubmed/30596000 http://dx.doi.org/10.1186/s12302-018-0178-5 |
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