Cargando…

Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring

The ability of thermophilic microorganisms and their enzymes to decompose biomass have attracted attention due to their quick reaction time, thermostability, and decreased risk of contamination. Exploitation of efficient thermostable glycoside hydrolases (GHs) could accelerate the industrialization...

Descripción completa

Detalles Bibliográficos
Autores principales: Lee, Li Sin, Goh, Kian Mau, Chan, Chia Sing, Annie Tan, Geok Yuan, Yin, Wai‐Fong, Chong, Chun Shiong, Chan, Kok‐Gan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6291792/
https://www.ncbi.nlm.nih.gov/pubmed/29602271
http://dx.doi.org/10.1002/mbo3.615
_version_ 1783380283716796416
author Lee, Li Sin
Goh, Kian Mau
Chan, Chia Sing
Annie Tan, Geok Yuan
Yin, Wai‐Fong
Chong, Chun Shiong
Chan, Kok‐Gan
author_facet Lee, Li Sin
Goh, Kian Mau
Chan, Chia Sing
Annie Tan, Geok Yuan
Yin, Wai‐Fong
Chong, Chun Shiong
Chan, Kok‐Gan
author_sort Lee, Li Sin
collection PubMed
description The ability of thermophilic microorganisms and their enzymes to decompose biomass have attracted attention due to their quick reaction time, thermostability, and decreased risk of contamination. Exploitation of efficient thermostable glycoside hydrolases (GHs) could accelerate the industrialization of biofuels and biochemicals. However, the full spectrum of thermophiles and their enzymes that are important for biomass degradation at high temperatures have not yet been thoroughly studied. We examined a Malaysian Y‐shaped Sungai Klah hot spring located within a wooded area. The fallen foliage that formed a thick layer of biomass bed under the heated water of the Y‐shaped Sungai Klah hot spring was an ideal environment for the discovery and analysis of microbial biomass decay communities. We sequenced the hypervariable regions of bacterial and archaeal 16S rRNA genes using total community DNA extracted from the hot spring. Data suggested that 25 phyla, 58 classes, 110 orders, 171 families, and 328 genera inhabited this hot spring. Among the detected genera, members of Acidimicrobium, Aeropyrum, Caldilinea, Caldisphaera, Chloracidobacterium, Chloroflexus, Desulfurobacterium, Fervidobacterium, Geobacillus, Meiothermus, Melioribacter, Methanothermococcus, Methanotorris, Roseiflexus, Thermoanaerobacter, Thermoanaerobacterium, Thermoanaerobaculum, and Thermosipho were the main thermophiles containing various GHs that play an important role in cellulose and hemicellulose breakdown. Collectively, the results suggest that the microbial community in this hot spring represents a good source for isolating efficient biomass degrading thermophiles and thermozymes.
format Online
Article
Text
id pubmed-6291792
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-62917922018-12-18 Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring Lee, Li Sin Goh, Kian Mau Chan, Chia Sing Annie Tan, Geok Yuan Yin, Wai‐Fong Chong, Chun Shiong Chan, Kok‐Gan Microbiologyopen Original Articles The ability of thermophilic microorganisms and their enzymes to decompose biomass have attracted attention due to their quick reaction time, thermostability, and decreased risk of contamination. Exploitation of efficient thermostable glycoside hydrolases (GHs) could accelerate the industrialization of biofuels and biochemicals. However, the full spectrum of thermophiles and their enzymes that are important for biomass degradation at high temperatures have not yet been thoroughly studied. We examined a Malaysian Y‐shaped Sungai Klah hot spring located within a wooded area. The fallen foliage that formed a thick layer of biomass bed under the heated water of the Y‐shaped Sungai Klah hot spring was an ideal environment for the discovery and analysis of microbial biomass decay communities. We sequenced the hypervariable regions of bacterial and archaeal 16S rRNA genes using total community DNA extracted from the hot spring. Data suggested that 25 phyla, 58 classes, 110 orders, 171 families, and 328 genera inhabited this hot spring. Among the detected genera, members of Acidimicrobium, Aeropyrum, Caldilinea, Caldisphaera, Chloracidobacterium, Chloroflexus, Desulfurobacterium, Fervidobacterium, Geobacillus, Meiothermus, Melioribacter, Methanothermococcus, Methanotorris, Roseiflexus, Thermoanaerobacter, Thermoanaerobacterium, Thermoanaerobaculum, and Thermosipho were the main thermophiles containing various GHs that play an important role in cellulose and hemicellulose breakdown. Collectively, the results suggest that the microbial community in this hot spring represents a good source for isolating efficient biomass degrading thermophiles and thermozymes. John Wiley and Sons Inc. 2018-03-30 /pmc/articles/PMC6291792/ /pubmed/29602271 http://dx.doi.org/10.1002/mbo3.615 Text en © 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Lee, Li Sin
Goh, Kian Mau
Chan, Chia Sing
Annie Tan, Geok Yuan
Yin, Wai‐Fong
Chong, Chun Shiong
Chan, Kok‐Gan
Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
title Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
title_full Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
title_fullStr Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
title_full_unstemmed Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
title_short Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
title_sort microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6291792/
https://www.ncbi.nlm.nih.gov/pubmed/29602271
http://dx.doi.org/10.1002/mbo3.615
work_keys_str_mv AT leelisin microbialdiversityofthermophileswithbiomassdeconstructionpotentialinafoliagerichhotspring
AT gohkianmau microbialdiversityofthermophileswithbiomassdeconstructionpotentialinafoliagerichhotspring
AT chanchiasing microbialdiversityofthermophileswithbiomassdeconstructionpotentialinafoliagerichhotspring
AT annietangeokyuan microbialdiversityofthermophileswithbiomassdeconstructionpotentialinafoliagerichhotspring
AT yinwaifong microbialdiversityofthermophileswithbiomassdeconstructionpotentialinafoliagerichhotspring
AT chongchunshiong microbialdiversityofthermophileswithbiomassdeconstructionpotentialinafoliagerichhotspring
AT chankokgan microbialdiversityofthermophileswithbiomassdeconstructionpotentialinafoliagerichhotspring