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Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
The ability of thermophilic microorganisms and their enzymes to decompose biomass have attracted attention due to their quick reaction time, thermostability, and decreased risk of contamination. Exploitation of efficient thermostable glycoside hydrolases (GHs) could accelerate the industrialization...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6291792/ https://www.ncbi.nlm.nih.gov/pubmed/29602271 http://dx.doi.org/10.1002/mbo3.615 |
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author | Lee, Li Sin Goh, Kian Mau Chan, Chia Sing Annie Tan, Geok Yuan Yin, Wai‐Fong Chong, Chun Shiong Chan, Kok‐Gan |
author_facet | Lee, Li Sin Goh, Kian Mau Chan, Chia Sing Annie Tan, Geok Yuan Yin, Wai‐Fong Chong, Chun Shiong Chan, Kok‐Gan |
author_sort | Lee, Li Sin |
collection | PubMed |
description | The ability of thermophilic microorganisms and their enzymes to decompose biomass have attracted attention due to their quick reaction time, thermostability, and decreased risk of contamination. Exploitation of efficient thermostable glycoside hydrolases (GHs) could accelerate the industrialization of biofuels and biochemicals. However, the full spectrum of thermophiles and their enzymes that are important for biomass degradation at high temperatures have not yet been thoroughly studied. We examined a Malaysian Y‐shaped Sungai Klah hot spring located within a wooded area. The fallen foliage that formed a thick layer of biomass bed under the heated water of the Y‐shaped Sungai Klah hot spring was an ideal environment for the discovery and analysis of microbial biomass decay communities. We sequenced the hypervariable regions of bacterial and archaeal 16S rRNA genes using total community DNA extracted from the hot spring. Data suggested that 25 phyla, 58 classes, 110 orders, 171 families, and 328 genera inhabited this hot spring. Among the detected genera, members of Acidimicrobium, Aeropyrum, Caldilinea, Caldisphaera, Chloracidobacterium, Chloroflexus, Desulfurobacterium, Fervidobacterium, Geobacillus, Meiothermus, Melioribacter, Methanothermococcus, Methanotorris, Roseiflexus, Thermoanaerobacter, Thermoanaerobacterium, Thermoanaerobaculum, and Thermosipho were the main thermophiles containing various GHs that play an important role in cellulose and hemicellulose breakdown. Collectively, the results suggest that the microbial community in this hot spring represents a good source for isolating efficient biomass degrading thermophiles and thermozymes. |
format | Online Article Text |
id | pubmed-6291792 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-62917922018-12-18 Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring Lee, Li Sin Goh, Kian Mau Chan, Chia Sing Annie Tan, Geok Yuan Yin, Wai‐Fong Chong, Chun Shiong Chan, Kok‐Gan Microbiologyopen Original Articles The ability of thermophilic microorganisms and their enzymes to decompose biomass have attracted attention due to their quick reaction time, thermostability, and decreased risk of contamination. Exploitation of efficient thermostable glycoside hydrolases (GHs) could accelerate the industrialization of biofuels and biochemicals. However, the full spectrum of thermophiles and their enzymes that are important for biomass degradation at high temperatures have not yet been thoroughly studied. We examined a Malaysian Y‐shaped Sungai Klah hot spring located within a wooded area. The fallen foliage that formed a thick layer of biomass bed under the heated water of the Y‐shaped Sungai Klah hot spring was an ideal environment for the discovery and analysis of microbial biomass decay communities. We sequenced the hypervariable regions of bacterial and archaeal 16S rRNA genes using total community DNA extracted from the hot spring. Data suggested that 25 phyla, 58 classes, 110 orders, 171 families, and 328 genera inhabited this hot spring. Among the detected genera, members of Acidimicrobium, Aeropyrum, Caldilinea, Caldisphaera, Chloracidobacterium, Chloroflexus, Desulfurobacterium, Fervidobacterium, Geobacillus, Meiothermus, Melioribacter, Methanothermococcus, Methanotorris, Roseiflexus, Thermoanaerobacter, Thermoanaerobacterium, Thermoanaerobaculum, and Thermosipho were the main thermophiles containing various GHs that play an important role in cellulose and hemicellulose breakdown. Collectively, the results suggest that the microbial community in this hot spring represents a good source for isolating efficient biomass degrading thermophiles and thermozymes. John Wiley and Sons Inc. 2018-03-30 /pmc/articles/PMC6291792/ /pubmed/29602271 http://dx.doi.org/10.1002/mbo3.615 Text en © 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Lee, Li Sin Goh, Kian Mau Chan, Chia Sing Annie Tan, Geok Yuan Yin, Wai‐Fong Chong, Chun Shiong Chan, Kok‐Gan Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring |
title | Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring |
title_full | Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring |
title_fullStr | Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring |
title_full_unstemmed | Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring |
title_short | Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring |
title_sort | microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6291792/ https://www.ncbi.nlm.nih.gov/pubmed/29602271 http://dx.doi.org/10.1002/mbo3.615 |
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