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MDAD: A Special Resource for Microbe-Drug Associations

The human-associated microbiota is diverse and complex. It takes an essential role in human health and behavior and is closely related to the occurrence and development of disease. Although the diversity and distribution of microbial communities have been widely studied, little is known about the fu...

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Autores principales: Sun, Ya-Zhou, Zhang, De-Hong, Cai, Shu-Bin, Ming, Zhong, Li, Jian-Qiang, Chen, Xing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6292923/
https://www.ncbi.nlm.nih.gov/pubmed/30581775
http://dx.doi.org/10.3389/fcimb.2018.00424
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author Sun, Ya-Zhou
Zhang, De-Hong
Cai, Shu-Bin
Ming, Zhong
Li, Jian-Qiang
Chen, Xing
author_facet Sun, Ya-Zhou
Zhang, De-Hong
Cai, Shu-Bin
Ming, Zhong
Li, Jian-Qiang
Chen, Xing
author_sort Sun, Ya-Zhou
collection PubMed
description The human-associated microbiota is diverse and complex. It takes an essential role in human health and behavior and is closely related to the occurrence and development of disease. Although the diversity and distribution of microbial communities have been widely studied, little is known about the function and dynamics of microbes in the human body or the complex mechanisms of interaction between them and drugs, which are important for drug discovery and design. A high-quality comprehensive microbe and drug association database will be extremely beneficial to explore the relationship between them. In this article, we developed the Microbe-Drug Association Database (MDAD), a collection of clinically or experimentally supported associations between microbes and drugs, collecting 5,055 entries that include 1,388 drugs and 180 microbes from multiple drug databases and related publications. Moreover, we provided detailed annotations for each record, including the molecular form of drugs or hyperlinks from DrugBank, microbe target information from Uniprot and the original reference links. We hope MDAD will be a useful resource for deeper understanding of microbe and drug interactions and will also be beneficial to drug design, disease therapy and human health.
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spelling pubmed-62929232018-12-21 MDAD: A Special Resource for Microbe-Drug Associations Sun, Ya-Zhou Zhang, De-Hong Cai, Shu-Bin Ming, Zhong Li, Jian-Qiang Chen, Xing Front Cell Infect Microbiol Cellular and Infection Microbiology The human-associated microbiota is diverse and complex. It takes an essential role in human health and behavior and is closely related to the occurrence and development of disease. Although the diversity and distribution of microbial communities have been widely studied, little is known about the function and dynamics of microbes in the human body or the complex mechanisms of interaction between them and drugs, which are important for drug discovery and design. A high-quality comprehensive microbe and drug association database will be extremely beneficial to explore the relationship between them. In this article, we developed the Microbe-Drug Association Database (MDAD), a collection of clinically or experimentally supported associations between microbes and drugs, collecting 5,055 entries that include 1,388 drugs and 180 microbes from multiple drug databases and related publications. Moreover, we provided detailed annotations for each record, including the molecular form of drugs or hyperlinks from DrugBank, microbe target information from Uniprot and the original reference links. We hope MDAD will be a useful resource for deeper understanding of microbe and drug interactions and will also be beneficial to drug design, disease therapy and human health. Frontiers Media S.A. 2018-12-07 /pmc/articles/PMC6292923/ /pubmed/30581775 http://dx.doi.org/10.3389/fcimb.2018.00424 Text en Copyright © 2018 Sun, Zhang, Cai, Ming, Li and Chen. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cellular and Infection Microbiology
Sun, Ya-Zhou
Zhang, De-Hong
Cai, Shu-Bin
Ming, Zhong
Li, Jian-Qiang
Chen, Xing
MDAD: A Special Resource for Microbe-Drug Associations
title MDAD: A Special Resource for Microbe-Drug Associations
title_full MDAD: A Special Resource for Microbe-Drug Associations
title_fullStr MDAD: A Special Resource for Microbe-Drug Associations
title_full_unstemmed MDAD: A Special Resource for Microbe-Drug Associations
title_short MDAD: A Special Resource for Microbe-Drug Associations
title_sort mdad: a special resource for microbe-drug associations
topic Cellular and Infection Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6292923/
https://www.ncbi.nlm.nih.gov/pubmed/30581775
http://dx.doi.org/10.3389/fcimb.2018.00424
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