Cargando…
Impact of index hopping and bias towards the reference allele on accuracy of genotype calls from low-coverage sequencing
BACKGROUND: Inherent sources of error and bias that affect the quality of sequence data include index hopping and bias towards the reference allele. The impact of these artefacts is likely greater for low-coverage data than for high-coverage data because low-coverage data has scant information and m...
Autores principales: | Ros-Freixedes, Roger, Battagin, Mara, Johnsson, Martin, Gorjanc, Gregor, Mileham, Alan J., Rounsley, Steve D., Hickey, John M. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6293637/ https://www.ncbi.nlm.nih.gov/pubmed/30545283 http://dx.doi.org/10.1186/s12711-018-0436-4 |
Ejemplares similares
-
A method for the allocation of sequencing resources in genotyped livestock populations
por: Gonen, Serap, et al.
Publicado: (2017) -
Hybrid peeling for fast and accurate calling, phasing, and imputation with sequence data of any coverage in pedigrees
por: Whalen, Andrew, et al.
Publicado: (2018) -
Sequence variation, evolutionary constraint, and selection at the CD163 gene in pigs
por: Johnsson, Martin, et al.
Publicado: (2018) -
Accuracy of whole-genome sequence imputation using hybrid peeling in large pedigreed livestock populations
por: Ros-Freixedes, Roger, et al.
Publicado: (2020) -
Evaluation of sequencing strategies for whole-genome imputation with hybrid peeling
por: Ros-Freixedes, Roger, et al.
Publicado: (2020)