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Bayesian hierarchical vector autoregressive models for patient-level predictive modeling
Predicting health outcomes from longitudinal health histories is of central importance to healthcare. Observational healthcare databases such as patient diary databases provide a rich resource for patient-level predictive modeling. In this paper, we propose a Bayesian hierarchical vector autoregress...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6294362/ https://www.ncbi.nlm.nih.gov/pubmed/30550560 http://dx.doi.org/10.1371/journal.pone.0208082 |
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author | Lu, Feihan Zheng, Yao Cleveland, Harrington Burton, Chris Madigan, David |
author_facet | Lu, Feihan Zheng, Yao Cleveland, Harrington Burton, Chris Madigan, David |
author_sort | Lu, Feihan |
collection | PubMed |
description | Predicting health outcomes from longitudinal health histories is of central importance to healthcare. Observational healthcare databases such as patient diary databases provide a rich resource for patient-level predictive modeling. In this paper, we propose a Bayesian hierarchical vector autoregressive (VAR) model to predict medical and psychological conditions using multivariate time series data. Compared to the existing patient-specific predictive VAR models, our model demonstrated higher accuracy in predicting future observations in terms of both point and interval estimates due to the pooling effect of the hierarchical model specification. In addition, by adopting an elastic-net prior, our model offers greater interpretability about the associations between variables of interest on both the population level and the patient level, as well as between-patient heterogeneity. We apply the model to two examples: 1) predicting substance use craving, negative affect and tobacco use among college students, and 2) predicting functional somatic symptoms and psychological discomforts. |
format | Online Article Text |
id | pubmed-6294362 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-62943622018-12-28 Bayesian hierarchical vector autoregressive models for patient-level predictive modeling Lu, Feihan Zheng, Yao Cleveland, Harrington Burton, Chris Madigan, David PLoS One Research Article Predicting health outcomes from longitudinal health histories is of central importance to healthcare. Observational healthcare databases such as patient diary databases provide a rich resource for patient-level predictive modeling. In this paper, we propose a Bayesian hierarchical vector autoregressive (VAR) model to predict medical and psychological conditions using multivariate time series data. Compared to the existing patient-specific predictive VAR models, our model demonstrated higher accuracy in predicting future observations in terms of both point and interval estimates due to the pooling effect of the hierarchical model specification. In addition, by adopting an elastic-net prior, our model offers greater interpretability about the associations between variables of interest on both the population level and the patient level, as well as between-patient heterogeneity. We apply the model to two examples: 1) predicting substance use craving, negative affect and tobacco use among college students, and 2) predicting functional somatic symptoms and psychological discomforts. Public Library of Science 2018-12-14 /pmc/articles/PMC6294362/ /pubmed/30550560 http://dx.doi.org/10.1371/journal.pone.0208082 Text en © 2018 Lu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Lu, Feihan Zheng, Yao Cleveland, Harrington Burton, Chris Madigan, David Bayesian hierarchical vector autoregressive models for patient-level predictive modeling |
title | Bayesian hierarchical vector autoregressive models for patient-level predictive modeling |
title_full | Bayesian hierarchical vector autoregressive models for patient-level predictive modeling |
title_fullStr | Bayesian hierarchical vector autoregressive models for patient-level predictive modeling |
title_full_unstemmed | Bayesian hierarchical vector autoregressive models for patient-level predictive modeling |
title_short | Bayesian hierarchical vector autoregressive models for patient-level predictive modeling |
title_sort | bayesian hierarchical vector autoregressive models for patient-level predictive modeling |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6294362/ https://www.ncbi.nlm.nih.gov/pubmed/30550560 http://dx.doi.org/10.1371/journal.pone.0208082 |
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