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Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions

Bactrocera cucurbitae (melon flies) are prominent invasive pests in southern China. To screen for a stable reference gene in melon flies suitable for comparing tissue samples subjected to different conditions in four categories (temperature, insect stage, days of age and gender), the expression of 1...

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Detalles Bibliográficos
Autores principales: Zhang, Yanan, Gong, Zhi, Li, Lei, Niu, Liming, Fu, Yueguan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296707/
https://www.ncbi.nlm.nih.gov/pubmed/30557388
http://dx.doi.org/10.1371/journal.pone.0202829
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author Zhang, Yanan
Gong, Zhi
Li, Lei
Niu, Liming
Fu, Yueguan
author_facet Zhang, Yanan
Gong, Zhi
Li, Lei
Niu, Liming
Fu, Yueguan
author_sort Zhang, Yanan
collection PubMed
description Bactrocera cucurbitae (melon flies) are prominent invasive pests in southern China. To screen for a stable reference gene in melon flies suitable for comparing tissue samples subjected to different conditions in four categories (temperature, insect stage, days of age and gender), the expression of 12 candidate reference genes under different treatment conditions was analyzed by real-time fluorescent quantitative PCR. The results obtained from a comprehensive analysis with geNorm, NormFinder, BestKeeper and RefFinder software showed that the most stable reference gene was RPL60, and the least stable reference gene was actin-5. We used a heat shock protein gene (HSP-90) to verify the results, and the conclusion was consistent. When the reference gene RPL60 was used as the reference gene, the relative expression of HSP-90 was essentially constant with the prolongation of treatment time. When actin-5 was used, HSP-90 expression changed markedly with treatment time. The results of this study can be used for further research on gene expression inBactrocera cucurbitae.
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spelling pubmed-62967072018-12-28 Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions Zhang, Yanan Gong, Zhi Li, Lei Niu, Liming Fu, Yueguan PLoS One Research Article Bactrocera cucurbitae (melon flies) are prominent invasive pests in southern China. To screen for a stable reference gene in melon flies suitable for comparing tissue samples subjected to different conditions in four categories (temperature, insect stage, days of age and gender), the expression of 12 candidate reference genes under different treatment conditions was analyzed by real-time fluorescent quantitative PCR. The results obtained from a comprehensive analysis with geNorm, NormFinder, BestKeeper and RefFinder software showed that the most stable reference gene was RPL60, and the least stable reference gene was actin-5. We used a heat shock protein gene (HSP-90) to verify the results, and the conclusion was consistent. When the reference gene RPL60 was used as the reference gene, the relative expression of HSP-90 was essentially constant with the prolongation of treatment time. When actin-5 was used, HSP-90 expression changed markedly with treatment time. The results of this study can be used for further research on gene expression inBactrocera cucurbitae. Public Library of Science 2018-12-17 /pmc/articles/PMC6296707/ /pubmed/30557388 http://dx.doi.org/10.1371/journal.pone.0202829 Text en © 2018 Zhang et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhang, Yanan
Gong, Zhi
Li, Lei
Niu, Liming
Fu, Yueguan
Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions
title Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions
title_full Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions
title_fullStr Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions
title_full_unstemmed Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions
title_short Evaluation of endogenous reference genes in Bactrocera cucurbitae by qPCR under different conditions
title_sort evaluation of endogenous reference genes in bactrocera cucurbitae by qpcr under different conditions
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296707/
https://www.ncbi.nlm.nih.gov/pubmed/30557388
http://dx.doi.org/10.1371/journal.pone.0202829
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