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An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors

Density-based spatial clustering of applications with noise (DBSCAN) algorithm can find clusters of arbitrary shape, while the noise points can be removed. Membrane computing is a novel research branch of bio-inspired computing, which seeks to discover new computational models/framework from biologi...

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Detalles Bibliográficos
Autores principales: Zhao, Yuzhen, Liu, Xiyu, Li, Xiufeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296794/
https://www.ncbi.nlm.nih.gov/pubmed/30557333
http://dx.doi.org/10.1371/journal.pone.0200751
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author Zhao, Yuzhen
Liu, Xiyu
Li, Xiufeng
author_facet Zhao, Yuzhen
Liu, Xiyu
Li, Xiufeng
author_sort Zhao, Yuzhen
collection PubMed
description Density-based spatial clustering of applications with noise (DBSCAN) algorithm can find clusters of arbitrary shape, while the noise points can be removed. Membrane computing is a novel research branch of bio-inspired computing, which seeks to discover new computational models/framework from biological cells. The obtained parallel and distributed computing models are usually called P systems. In this work, DBSCAN algorithm is improved by using parallel evolution mechanism and hierarchical membrane structure in cell-like P systems with promoters and inhibitors, where promoters and inhibitors are utilized to regulate parallelism of objects evolution. Experiment results show that the proposed algorithm performs well in big cluster analysis. The time complexity is improved to O(n), in comparison with conventional DBSCAN of O(n(2)). The results give some hints to improve conventional algorithms by using the hierarchical framework and parallel evolution mechanism in membrane computing models.
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spelling pubmed-62967942018-12-28 An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors Zhao, Yuzhen Liu, Xiyu Li, Xiufeng PLoS One Research Article Density-based spatial clustering of applications with noise (DBSCAN) algorithm can find clusters of arbitrary shape, while the noise points can be removed. Membrane computing is a novel research branch of bio-inspired computing, which seeks to discover new computational models/framework from biological cells. The obtained parallel and distributed computing models are usually called P systems. In this work, DBSCAN algorithm is improved by using parallel evolution mechanism and hierarchical membrane structure in cell-like P systems with promoters and inhibitors, where promoters and inhibitors are utilized to regulate parallelism of objects evolution. Experiment results show that the proposed algorithm performs well in big cluster analysis. The time complexity is improved to O(n), in comparison with conventional DBSCAN of O(n(2)). The results give some hints to improve conventional algorithms by using the hierarchical framework and parallel evolution mechanism in membrane computing models. Public Library of Science 2018-12-17 /pmc/articles/PMC6296794/ /pubmed/30557333 http://dx.doi.org/10.1371/journal.pone.0200751 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Zhao, Yuzhen
Liu, Xiyu
Li, Xiufeng
An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors
title An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors
title_full An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors
title_fullStr An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors
title_full_unstemmed An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors
title_short An improved DBSCAN algorithm based on cell-like P systems with promoters and inhibitors
title_sort improved dbscan algorithm based on cell-like p systems with promoters and inhibitors
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6296794/
https://www.ncbi.nlm.nih.gov/pubmed/30557333
http://dx.doi.org/10.1371/journal.pone.0200751
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