Cargando…

Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites

BACKGROUND: The discovery of an unexpected genetic sequence raised doubts about the specificity of a primer pair targeting Babesia spp. and Theileria spp. This study aimed to check the specificity of this primer pair. METHODS: Conventional end-point PCR and real-time PCR protocols using primers targ...

Descripción completa

Detalles Bibliográficos
Autor principal: de Mendonça, Philippe Gil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Tehran University of Medical Sciences 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6297730/
https://www.ncbi.nlm.nih.gov/pubmed/30584555
_version_ 1783381192372912128
author de Mendonça, Philippe Gil
author_facet de Mendonça, Philippe Gil
author_sort de Mendonça, Philippe Gil
collection PubMed
description BACKGROUND: The discovery of an unexpected genetic sequence raised doubts about the specificity of a primer pair targeting Babesia spp. and Theileria spp. This study aimed to check the specificity of this primer pair. METHODS: Conventional end-point PCR and real-time PCR protocols using primers targeting the 18S rRNA gene V4 hypervariable region of Babesia spp. and Theileria spp. were tested for potential cross-genera amplification using DNA from a palette of parasitic protists and pathogenic bacteria as a template. These investigations took place at the Ludwig Maximilian University of Munich (Germany) in 2010 as part of the EDEN project. RESULTS: Successful amplification was obtained with DNA from five apicomplexan genera: Babesia, Theileria, Hepatozoon, Toxoplasma, and Hammondia. No amplicons were obtained when DNA from Leishmania infantum or bacteria within the genera Borrelia, Leptospira or Anaplasma was used as a template. CONCLUSION: This cross-genera amplification ability is useful for the quick exclusion of many parasite species from PCR negative diagnostic samples. Accurate species identification from PCR positive samples requires genetic sequencing of the amplicon.
format Online
Article
Text
id pubmed-6297730
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Tehran University of Medical Sciences
record_format MEDLINE/PubMed
spelling pubmed-62977302018-12-24 Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites de Mendonça, Philippe Gil J Arthropod Borne Dis Short Communication BACKGROUND: The discovery of an unexpected genetic sequence raised doubts about the specificity of a primer pair targeting Babesia spp. and Theileria spp. This study aimed to check the specificity of this primer pair. METHODS: Conventional end-point PCR and real-time PCR protocols using primers targeting the 18S rRNA gene V4 hypervariable region of Babesia spp. and Theileria spp. were tested for potential cross-genera amplification using DNA from a palette of parasitic protists and pathogenic bacteria as a template. These investigations took place at the Ludwig Maximilian University of Munich (Germany) in 2010 as part of the EDEN project. RESULTS: Successful amplification was obtained with DNA from five apicomplexan genera: Babesia, Theileria, Hepatozoon, Toxoplasma, and Hammondia. No amplicons were obtained when DNA from Leishmania infantum or bacteria within the genera Borrelia, Leptospira or Anaplasma was used as a template. CONCLUSION: This cross-genera amplification ability is useful for the quick exclusion of many parasite species from PCR negative diagnostic samples. Accurate species identification from PCR positive samples requires genetic sequencing of the amplicon. Tehran University of Medical Sciences 2018-09-30 /pmc/articles/PMC6297730/ /pubmed/30584555 Text en Copyright© Iranian Society of Medical Entomology & Tehran University of Medical Sciences http://creativecommons.org/licenses/by/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License which allows users to read, copy, distribute and make derivative works for non-commercial purposes from the material, as long as the author of the original work is cited properly.
spellingShingle Short Communication
de Mendonça, Philippe Gil
Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites
title Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites
title_full Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites
title_fullStr Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites
title_full_unstemmed Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites
title_short Cross-Genera PCR Amplification of DNA from Apicomplexan Parasites
title_sort cross-genera pcr amplification of dna from apicomplexan parasites
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6297730/
https://www.ncbi.nlm.nih.gov/pubmed/30584555
work_keys_str_mv AT demendoncaphilippegil crossgenerapcramplificationofdnafromapicomplexanparasites