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Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis
In order to identify potential diagnostic and prognostic biomarkers, and treatment targets for head and neck squamous cell carcinoma (HNSCC), the present study obtained the gene expression profiles in HNSCC through public data mining, and core genes were identified using a series of bioinformatics a...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6297764/ https://www.ncbi.nlm.nih.gov/pubmed/30431092 http://dx.doi.org/10.3892/mmr.2018.9639 |
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author | Zhao, Lei Chi, Weiwei Cao, Huan Cui, Weina Meng, Wenxia Guo, Wei Wang, Baoshan |
author_facet | Zhao, Lei Chi, Weiwei Cao, Huan Cui, Weina Meng, Wenxia Guo, Wei Wang, Baoshan |
author_sort | Zhao, Lei |
collection | PubMed |
description | In order to identify potential diagnostic and prognostic biomarkers, and treatment targets for head and neck squamous cell carcinoma (HNSCC), the present study obtained the gene expression profiles in HNSCC through public data mining, and core genes were identified using a series of bioinformatics analysis methods and databases. A total of nine hub genes (SPP1, ITGA6, TMPRSS11D, MMP1, LAMC2, FAT1, ACTA1, SERPINE1 and CEACAM1) were identified to be significantly correlated with HNSCC. Furthermore, overall survival analysis demonstrated that the expression values of hub genes were associated with overall survival in HNSCC. Furthermore, certain of the identified genes, including, TMPRSS11D, ACTA1 and CEACAM1, have not been thoroughly investigated in HNSCC previously. Taken together, the nine hub genes obtained by screening in the present study may serve as potential tumor markers and important prognostic indicators for HNSCC. |
format | Online Article Text |
id | pubmed-6297764 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-62977642018-12-26 Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis Zhao, Lei Chi, Weiwei Cao, Huan Cui, Weina Meng, Wenxia Guo, Wei Wang, Baoshan Mol Med Rep Articles In order to identify potential diagnostic and prognostic biomarkers, and treatment targets for head and neck squamous cell carcinoma (HNSCC), the present study obtained the gene expression profiles in HNSCC through public data mining, and core genes were identified using a series of bioinformatics analysis methods and databases. A total of nine hub genes (SPP1, ITGA6, TMPRSS11D, MMP1, LAMC2, FAT1, ACTA1, SERPINE1 and CEACAM1) were identified to be significantly correlated with HNSCC. Furthermore, overall survival analysis demonstrated that the expression values of hub genes were associated with overall survival in HNSCC. Furthermore, certain of the identified genes, including, TMPRSS11D, ACTA1 and CEACAM1, have not been thoroughly investigated in HNSCC previously. Taken together, the nine hub genes obtained by screening in the present study may serve as potential tumor markers and important prognostic indicators for HNSCC. D.A. Spandidos 2019-01 2018-11-09 /pmc/articles/PMC6297764/ /pubmed/30431092 http://dx.doi.org/10.3892/mmr.2018.9639 Text en Copyright: © Zhao et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Zhao, Lei Chi, Weiwei Cao, Huan Cui, Weina Meng, Wenxia Guo, Wei Wang, Baoshan Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis |
title | Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis |
title_full | Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis |
title_fullStr | Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis |
title_full_unstemmed | Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis |
title_short | Screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis |
title_sort | screening and clinical significance of tumor markers in head and neck squamous cell carcinoma through bioinformatics analysis |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6297764/ https://www.ncbi.nlm.nih.gov/pubmed/30431092 http://dx.doi.org/10.3892/mmr.2018.9639 |
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