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Volatilomics: a non-invasive technique for screening plant phenotypic traits

BACKGROUND: Climate change represents a grand challenge for agricultural productivity. Understanding complex plant traits such as stress tolerance, disease resistance or crop yield is thus essential for breeding and the development of sustainable agriculture strategies. When screening for the most r...

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Autores principales: Jud, Werner, Winkler, J. Barbro, Niederbacher, Bishu, Niederbacher, Simon, Schnitzler, Jörg-Peter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6297985/
https://www.ncbi.nlm.nih.gov/pubmed/30568721
http://dx.doi.org/10.1186/s13007-018-0378-4
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author Jud, Werner
Winkler, J. Barbro
Niederbacher, Bishu
Niederbacher, Simon
Schnitzler, Jörg-Peter
author_facet Jud, Werner
Winkler, J. Barbro
Niederbacher, Bishu
Niederbacher, Simon
Schnitzler, Jörg-Peter
author_sort Jud, Werner
collection PubMed
description BACKGROUND: Climate change represents a grand challenge for agricultural productivity. Understanding complex plant traits such as stress tolerance, disease resistance or crop yield is thus essential for breeding and the development of sustainable agriculture strategies. When screening for the most robust plant phenotypes, fast, high-throughput phenotyping represents the means of choice. RESULTS: We have developed a plant phenotyping platform to measure the emission of volatile organic compounds (VOCs), photosynthetic gas exchange and transpiration under ambient, or abiotic and biotic stress conditions. These parameters are highly suitable markers to non-invasively and dynamically study plant growth and plant stress status, making them perfect test variables for long-term, online plant monitoring. Here we introduce the new phenotyping platform, termed VOC-SCREEN, and present results of a first case study with three barley cultivars, demonstrating that the plant’s volatilome can be successfully applied to discriminate different barley varieties. CONCLUSION: Volatilomics is a promising technique to non-invasively screen for plant phenotypic traits.
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spelling pubmed-62979852018-12-19 Volatilomics: a non-invasive technique for screening plant phenotypic traits Jud, Werner Winkler, J. Barbro Niederbacher, Bishu Niederbacher, Simon Schnitzler, Jörg-Peter Plant Methods Methodology BACKGROUND: Climate change represents a grand challenge for agricultural productivity. Understanding complex plant traits such as stress tolerance, disease resistance or crop yield is thus essential for breeding and the development of sustainable agriculture strategies. When screening for the most robust plant phenotypes, fast, high-throughput phenotyping represents the means of choice. RESULTS: We have developed a plant phenotyping platform to measure the emission of volatile organic compounds (VOCs), photosynthetic gas exchange and transpiration under ambient, or abiotic and biotic stress conditions. These parameters are highly suitable markers to non-invasively and dynamically study plant growth and plant stress status, making them perfect test variables for long-term, online plant monitoring. Here we introduce the new phenotyping platform, termed VOC-SCREEN, and present results of a first case study with three barley cultivars, demonstrating that the plant’s volatilome can be successfully applied to discriminate different barley varieties. CONCLUSION: Volatilomics is a promising technique to non-invasively screen for plant phenotypic traits. BioMed Central 2018-12-18 /pmc/articles/PMC6297985/ /pubmed/30568721 http://dx.doi.org/10.1186/s13007-018-0378-4 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Methodology
Jud, Werner
Winkler, J. Barbro
Niederbacher, Bishu
Niederbacher, Simon
Schnitzler, Jörg-Peter
Volatilomics: a non-invasive technique for screening plant phenotypic traits
title Volatilomics: a non-invasive technique for screening plant phenotypic traits
title_full Volatilomics: a non-invasive technique for screening plant phenotypic traits
title_fullStr Volatilomics: a non-invasive technique for screening plant phenotypic traits
title_full_unstemmed Volatilomics: a non-invasive technique for screening plant phenotypic traits
title_short Volatilomics: a non-invasive technique for screening plant phenotypic traits
title_sort volatilomics: a non-invasive technique for screening plant phenotypic traits
topic Methodology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6297985/
https://www.ncbi.nlm.nih.gov/pubmed/30568721
http://dx.doi.org/10.1186/s13007-018-0378-4
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