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Local epigenomic state cannot discriminate interacting and non-interacting enhancer–promoter pairs with high accuracy

We report an experimental design issue in recent machine learning formulations of the enhancer-promoter interaction problem arising from the fact that many enhancer-promoter pairs share features. Cross-fold validation schemes which do not correctly separate these feature sharing enhancer-promoter pa...

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Detalles Bibliográficos
Autores principales: Xi, Wang, Beer, Michael A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6298642/
https://www.ncbi.nlm.nih.gov/pubmed/30562350
http://dx.doi.org/10.1371/journal.pcbi.1006625

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