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A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene

It is well-established that there is a strong genetic contribution to the aetiology of attention deficit hyperactivity disorder (ADHD). Here, we employed a hypothesis-free genome-wide association study (GWAS) design in a sample of 480 clinical childhood ADHD cases and 1208 controls to search for nov...

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Autores principales: Hawi, Ziarih, Yates, Hannah, Pinar, Ari, Arnatkeviciute, Aurina, Johnson, Beth, Tong, Janette, Pugsley, Kealan, Dark, Callum, Pauper, Marc, Klein, Marieke, Heussler, Helen S., Hiscock, Harriet, Fornito, Alex, Tiego, Jeggan, Finlay, Amy, Vance, Alasdair, Gill, Michael, Kent, Lindsey, Bellgrove, Mark A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6298965/
https://www.ncbi.nlm.nih.gov/pubmed/30563984
http://dx.doi.org/10.1038/s41398-018-0329-x
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author Hawi, Ziarih
Yates, Hannah
Pinar, Ari
Arnatkeviciute, Aurina
Johnson, Beth
Tong, Janette
Pugsley, Kealan
Dark, Callum
Pauper, Marc
Klein, Marieke
Heussler, Helen S.
Hiscock, Harriet
Fornito, Alex
Tiego, Jeggan
Finlay, Amy
Vance, Alasdair
Gill, Michael
Kent, Lindsey
Bellgrove, Mark A.
author_facet Hawi, Ziarih
Yates, Hannah
Pinar, Ari
Arnatkeviciute, Aurina
Johnson, Beth
Tong, Janette
Pugsley, Kealan
Dark, Callum
Pauper, Marc
Klein, Marieke
Heussler, Helen S.
Hiscock, Harriet
Fornito, Alex
Tiego, Jeggan
Finlay, Amy
Vance, Alasdair
Gill, Michael
Kent, Lindsey
Bellgrove, Mark A.
author_sort Hawi, Ziarih
collection PubMed
description It is well-established that there is a strong genetic contribution to the aetiology of attention deficit hyperactivity disorder (ADHD). Here, we employed a hypothesis-free genome-wide association study (GWAS) design in a sample of 480 clinical childhood ADHD cases and 1208 controls to search for novel genetic risk loci for ADHD. DNA was genotyped using Illumina’s Human Infinium PsychArray-24v1.2., and the data were subsequently imputed to the 1000 Genomes reference panel. Rigorous quality control and pruning of genotypes at both individual subject and single nucleotide polymorphism (SNP) levels was performed. Polygenic risk score (PGRS) analysis revealed that ADHD case–control status was explained by genetic risk for ADHD, but no other major psychiatric disorders. Logistic regression analysis was performed genome-wide to test the association between SNPs and ADHD case–control status. We observed a genome-wide significant association (p = 3.15E−08) between ADHD and rs6686722, mapped to the Tenascin R (TNR) gene. Members of this gene family are extracellular matrix glycoproteins that play a role in neural cell adhesion and neurite outgrowth. Suggestive evidence of associations with ADHD was observed for an additional 111 SNPs (⩽9.91E−05). Although intriguing, the association between DNA variation in the TNR gene and ADHD should be viewed as preliminary given the small sample size of this discovery dataset.
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spelling pubmed-62989652018-12-26 A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene Hawi, Ziarih Yates, Hannah Pinar, Ari Arnatkeviciute, Aurina Johnson, Beth Tong, Janette Pugsley, Kealan Dark, Callum Pauper, Marc Klein, Marieke Heussler, Helen S. Hiscock, Harriet Fornito, Alex Tiego, Jeggan Finlay, Amy Vance, Alasdair Gill, Michael Kent, Lindsey Bellgrove, Mark A. Transl Psychiatry Article It is well-established that there is a strong genetic contribution to the aetiology of attention deficit hyperactivity disorder (ADHD). Here, we employed a hypothesis-free genome-wide association study (GWAS) design in a sample of 480 clinical childhood ADHD cases and 1208 controls to search for novel genetic risk loci for ADHD. DNA was genotyped using Illumina’s Human Infinium PsychArray-24v1.2., and the data were subsequently imputed to the 1000 Genomes reference panel. Rigorous quality control and pruning of genotypes at both individual subject and single nucleotide polymorphism (SNP) levels was performed. Polygenic risk score (PGRS) analysis revealed that ADHD case–control status was explained by genetic risk for ADHD, but no other major psychiatric disorders. Logistic regression analysis was performed genome-wide to test the association between SNPs and ADHD case–control status. We observed a genome-wide significant association (p = 3.15E−08) between ADHD and rs6686722, mapped to the Tenascin R (TNR) gene. Members of this gene family are extracellular matrix glycoproteins that play a role in neural cell adhesion and neurite outgrowth. Suggestive evidence of associations with ADHD was observed for an additional 111 SNPs (⩽9.91E−05). Although intriguing, the association between DNA variation in the TNR gene and ADHD should be viewed as preliminary given the small sample size of this discovery dataset. Nature Publishing Group UK 2018-12-18 /pmc/articles/PMC6298965/ /pubmed/30563984 http://dx.doi.org/10.1038/s41398-018-0329-x Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Hawi, Ziarih
Yates, Hannah
Pinar, Ari
Arnatkeviciute, Aurina
Johnson, Beth
Tong, Janette
Pugsley, Kealan
Dark, Callum
Pauper, Marc
Klein, Marieke
Heussler, Helen S.
Hiscock, Harriet
Fornito, Alex
Tiego, Jeggan
Finlay, Amy
Vance, Alasdair
Gill, Michael
Kent, Lindsey
Bellgrove, Mark A.
A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene
title A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene
title_full A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene
title_fullStr A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene
title_full_unstemmed A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene
title_short A case–control genome-wide association study of ADHD discovers a novel association with the tenascin R (TNR) gene
title_sort case–control genome-wide association study of adhd discovers a novel association with the tenascin r (tnr) gene
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6298965/
https://www.ncbi.nlm.nih.gov/pubmed/30563984
http://dx.doi.org/10.1038/s41398-018-0329-x
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