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From prioritisation to understanding: mechanistic predictions of variant effects

The widespread application of sequencing technologies, used for example to obtain data from healthy individuals or patient cohorts, has led to the identification of numerous mutations, the effect of which remains largely unclear. Therefore, developing approaches allowing accurate in‐silico predictio...

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Detalles Bibliográficos
Autores principales: Slodkowicz, Greg, Babu, M Madan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6301328/
https://www.ncbi.nlm.nih.gov/pubmed/30573689
http://dx.doi.org/10.15252/msb.20188741
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author Slodkowicz, Greg
Babu, M Madan
author_facet Slodkowicz, Greg
Babu, M Madan
author_sort Slodkowicz, Greg
collection PubMed
description The widespread application of sequencing technologies, used for example to obtain data from healthy individuals or patient cohorts, has led to the identification of numerous mutations, the effect of which remains largely unclear. Therefore, developing approaches allowing accurate in‐silico prediction of mutation effects is becoming increasingly important. In their recent study, Beltrao and colleagues (Wagih et al, 2018) describe an integrative approach for determining the effects of mutations from the perspective of protein structure, conservation and transcription factor binding. This allows for predicting the mechanisms underlying the most impactful variants rather than just identifying these variants.
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spelling pubmed-63013282019-01-02 From prioritisation to understanding: mechanistic predictions of variant effects Slodkowicz, Greg Babu, M Madan Mol Syst Biol News & Views The widespread application of sequencing technologies, used for example to obtain data from healthy individuals or patient cohorts, has led to the identification of numerous mutations, the effect of which remains largely unclear. Therefore, developing approaches allowing accurate in‐silico prediction of mutation effects is becoming increasingly important. In their recent study, Beltrao and colleagues (Wagih et al, 2018) describe an integrative approach for determining the effects of mutations from the perspective of protein structure, conservation and transcription factor binding. This allows for predicting the mechanisms underlying the most impactful variants rather than just identifying these variants. John Wiley and Sons Inc. 2018-12-20 /pmc/articles/PMC6301328/ /pubmed/30573689 http://dx.doi.org/10.15252/msb.20188741 Text en © 2018 MRC Laboratory of Molecular Biology. Published under the terms of the CC BY 4.0 license This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle News & Views
Slodkowicz, Greg
Babu, M Madan
From prioritisation to understanding: mechanistic predictions of variant effects
title From prioritisation to understanding: mechanistic predictions of variant effects
title_full From prioritisation to understanding: mechanistic predictions of variant effects
title_fullStr From prioritisation to understanding: mechanistic predictions of variant effects
title_full_unstemmed From prioritisation to understanding: mechanistic predictions of variant effects
title_short From prioritisation to understanding: mechanistic predictions of variant effects
title_sort from prioritisation to understanding: mechanistic predictions of variant effects
topic News & Views
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6301328/
https://www.ncbi.nlm.nih.gov/pubmed/30573689
http://dx.doi.org/10.15252/msb.20188741
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