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Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing

The data represents the diversity and distribution of fungal communities in Kongsfjorden, Arctic. The metagenomic DNA analysis was performed using next generation sequencing technology (Illumina MiSeq). Sequence data from amplified internal transcribed spacers (ITS) 2 region with fungal-specific pri...

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Autores principales: Kabeer, Farha Arakkaveettil, Jabir, T., Krishnan, K.P., Abdulla, Mohamed Hatha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6301978/
https://www.ncbi.nlm.nih.gov/pubmed/30581925
http://dx.doi.org/10.1016/j.dib.2018.12.026
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author Kabeer, Farha Arakkaveettil
Jabir, T.
Krishnan, K.P.
Abdulla, Mohamed Hatha
author_facet Kabeer, Farha Arakkaveettil
Jabir, T.
Krishnan, K.P.
Abdulla, Mohamed Hatha
author_sort Kabeer, Farha Arakkaveettil
collection PubMed
description The data represents the diversity and distribution of fungal communities in Kongsfjorden, Arctic. The metagenomic DNA analysis was performed using next generation sequencing technology (Illumina MiSeq). Sequence data from amplified internal transcribed spacers (ITS) 2 region with fungal-specific primers exposed 83,417 sequences belonging to 7 operational taxonomic units (OTUs). Five of these OTUs belonged to Ascomycota, and one each to Basidiomycota and unclassified group. Aspergillus, Candida, Emericella and Nakaseomyces were the different genera identified and they belonged to the fungal orders Helotiales, Eurotiales and Saccharomycetales. The data explored the presence of important fungal communities in the Arctic marine ecosystem. Metagenome data is now available at NCBI under the Sequence Read Archive (SRA) database with accession no. SRP152688.
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spelling pubmed-63019782018-12-21 Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing Kabeer, Farha Arakkaveettil Jabir, T. Krishnan, K.P. Abdulla, Mohamed Hatha Data Brief Agricultural and Biological Science The data represents the diversity and distribution of fungal communities in Kongsfjorden, Arctic. The metagenomic DNA analysis was performed using next generation sequencing technology (Illumina MiSeq). Sequence data from amplified internal transcribed spacers (ITS) 2 region with fungal-specific primers exposed 83,417 sequences belonging to 7 operational taxonomic units (OTUs). Five of these OTUs belonged to Ascomycota, and one each to Basidiomycota and unclassified group. Aspergillus, Candida, Emericella and Nakaseomyces were the different genera identified and they belonged to the fungal orders Helotiales, Eurotiales and Saccharomycetales. The data explored the presence of important fungal communities in the Arctic marine ecosystem. Metagenome data is now available at NCBI under the Sequence Read Archive (SRA) database with accession no. SRP152688. Elsevier 2018-12-13 /pmc/articles/PMC6301978/ /pubmed/30581925 http://dx.doi.org/10.1016/j.dib.2018.12.026 Text en © 2018 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Kabeer, Farha Arakkaveettil
Jabir, T.
Krishnan, K.P.
Abdulla, Mohamed Hatha
Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing
title Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing
title_full Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing
title_fullStr Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing
title_full_unstemmed Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing
title_short Metagenomic data of fungal community in Kongsfjorden, Arctic using Illumina next generation sequencing
title_sort metagenomic data of fungal community in kongsfjorden, arctic using illumina next generation sequencing
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6301978/
https://www.ncbi.nlm.nih.gov/pubmed/30581925
http://dx.doi.org/10.1016/j.dib.2018.12.026
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