Cargando…

Genome-wide assessment of genetic diversity and population structure insights into admixture and introgression in Chinese indigenous cattle

BACKGROUND: China exhibits a great diversity of ecosystems and abundant cattle resources, with nearly 30 million cattle from 53 indigenous breeds reared in specific geographic regions. To explore the genetic diversity and population structure of Chinese indigenous cattle, a population genetic analys...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Wengang, Gao, Xue, Zhang, Yang, Zhao, Yumin, Zhang, Jiabao, Jia, Yutang, Zhu, Bo, Xu, Lingyang, Zhang, Lupei, Gao, Huijiang, Li, Junya, Chen, Yan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2018
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6302425/ https://www.ncbi.nlm.nih.gov/pubmed/30572824 http://dx.doi.org/10.1186/s12863-018-0705-9

Ejemplares similares

Genome-wide scan reveals genetic divergence and diverse adaptive selection in Chinese local cattle
por: Xu, Lingyang, et al.
Publicado: (2019)

Genome-wide analysis reveals differential selection involved with copy number variation in diverse Chinese Cattle
por: Yang, Liu, et al.
Publicado: (2017)

Theoretical Evaluation of Multi-Breed Genomic Prediction in Chinese Indigenous Cattle
por: Xu, Lei, et al.
Publicado: (2019)

Weighted Single-Step Genome-Wide Association Study for Growth Traits in Chinese Simmental Beef Cattle
por: Zhuang, Zhanwei, et al.
Publicado: (2020)

Genome wide association study identifies SNPs associated with fatty acid composition in Chinese Wagyu cattle
por: Wang, Zezhao, et al.
Publicado: (2019)

Multi-strategy genome-wide association studies identify the DCAF16-NCAPG region as a susceptibility locus for average daily gain in cattle
por: Zhang, Wengang, et al.
Publicado: (2016)

Genome-Wide Association Study Reveals the PLAG1 Gene for Knuckle, Biceps and Shank Weight in Simmental Beef Cattle
por: Song, Yuxin, et al.
Publicado: (2016)

Genome-Wide Assessment of Runs of Homozygosity in Chinese Wagyu Beef Cattle
por: Zhao, Guoyao, et al.
Publicado: (2020)

Genome-Wide Association Analysis of Growth Curve Parameters in Chinese Simmental Beef Cattle
por: Duan, Xinghai, et al.
Publicado: (2021)

Genome wide association study and genomic prediction for fatty acid composition in Chinese Simmental beef cattle using high density SNP array
por: Zhu, Bo, et al.
Publicado: (2017)

Genome-Wide Association Study Based on Random Regression Model Reveals Candidate Genes Associated with Longitudinal Data in Chinese Simmental Beef Cattle
por: Du, Lili, et al.
Publicado: (2021)

Genomic Patterns of Homozygosity in Chinese Local Cattle
por: Xu, Lingyang, et al.
Publicado: (2019)

Genome-Wide Scan Identifies Selection Signatures in Chinese Wagyu Cattle Using a High-Density SNP Array
por: Wang, Zezhao, et al.
Publicado: (2019)

Searching for new loci and candidate genes for economically important traits through gene-based association analysis of Simmental cattle
por: Xia, Jiangwei, et al.
Publicado: (2017)

Pathway-Based Genome-Wide Association Studies for Two Meat Production Traits in Simmental Cattle
por: Fan, Huizhong, et al.
Publicado: (2015)

Evaluation of GBLUP, BayesB and elastic net for genomic prediction in Chinese Simmental beef cattle
por: Wang, Xiaoqiao, et al.
Publicado: (2019)

Incorporating genome-wide and transcriptome-wide association studies to identify genetic elements of longissimus dorsi muscle in Huaxi cattle
por: Liang, Mang, et al.
Publicado: (2023)

The eQTL colocalization and transcriptome-wide association study identify potentially causal genes responsible for economic traits in Simmental beef cattle
por: Cai, Wentao, et al.
Publicado: (2023)

Evaluation of Linkage Disequilibrium, Effective Population Size and Haplotype Block Structure in Chinese Cattle
por: Xu, Lei, et al.
Publicado: (2019)

Incorporating Genome Annotation Into Genomic Prediction for Carcass Traits in Chinese Simmental Beef Cattle
por: Xu, Ling, et al.
Publicado: (2020)

Genomic Prediction and Association Analysis with Models Including Dominance Effects for Important Traits in Chinese Simmental Beef Cattle
por: Liu, Ying, et al.
Publicado: (2019)

Genome-Wide Association Studies Using Haplotypes and Individual SNPs in Simmental Cattle
por: Wu, Yang, et al.
Publicado: (2014)

PCA-Based Multiple-Trait GWAS Analysis: A Powerful Model for Exploring Pleiotropy
por: Zhang, Wengang, et al.
Publicado: (2018)

Runs of homozygosity analysis reveals consensus homozygous regions affecting production traits in Chinese Simmental beef cattle
por: Zhao, Guoyao, et al.
Publicado: (2021)

Identification and validation of a novel candidate gene regulating net meat weight in Simmental beef cattle based on imputed next‐generation sequencing
por: Bordbar, Farhad, et al.
Publicado: (2020)

Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle
por: Xu, Lingyang, et al.
Publicado: (2019)

Transcriptional atlas analysis from multiple tissues reveals the expression specificity patterns in beef cattle
por: Zhang, Tianliu, et al.
Publicado: (2022)

Comparative Transcriptome Analyses of Gayal (Bos frontalis), Yak (Bos grunniens), and Cattle (Bos taurus) Reveal the High-Altitude Adaptation
por: Ma, Jun, et al.
Publicado: (2022)

Identification of Candidate Variants Associated With Bone Weight Using Whole Genome Sequence in Beef Cattle
por: Niu, Qunhao, et al.
Publicado: (2021)

The Impact of Variable Degrees of Freedom and Scale Parameters in Bayesian Methods for Genomic Prediction in Chinese Simmental Beef Cattle
por: Zhu, Bo, et al.
Publicado: (2016)

Constructing a comprehensive gene co-expression based interactome in Bos taurus
por: Chen, Yan, et al.
Publicado: (2017)

Transcriptome profiling analysis of muscle tissue reveals potential candidate genes affecting water holding capacity in Chinese Simmental beef cattle
por: Du, Lili, et al.
Publicado: (2021)

Validation of the Prediction Accuracy for 13 Traits in Chinese Simmental Beef Cattle Using a Preselected Low-Density SNP Panel
por: Xu, Ling, et al.
Publicado: (2021)

Cis-eQTL Analysis and Functional Validation of Candidate Genes for Carcass Yield Traits in Beef Cattle
por: Wang, Tianzhen, et al.
Publicado: (2022)

Genomic diversity and admixture patterns among six Chinese indigenous cattle breeds in Yunnan
por: Li, Rong, et al.
Publicado: (2019)

Genome-wide diversity and admixture of five indigenous cattle populations from the Tigray region of northern Ethiopia
por: Zegeye, Tsadkan, et al.
Publicado: (2023)

Genomic prediction with parallel computing for slaughter traits in Chinese Simmental beef cattle using high-density genotypes
por: Guo, Peng, et al.
Publicado: (2017)

Transcriptomics and Lipid Metabolomics Analysis of Subcutaneous, Visceral, and Abdominal Adipose Tissues of Beef Cattle
por: Du, Lili, et al.
Publicado: (2022)

Genetic Association Analysis of Copy Number Variations for Meat Quality in Beef Cattle
por: Wu, Jiayuan, et al.
Publicado: (2023)

A Fast and Powerful Empirical Bayes Method for Genome-Wide Association Studies
por: Chang, Tianpeng, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_hhr5g6b55hc43rsues537dvk9m