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Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women
MED12, a subunit of mediator complex genes is known to harbor genetic mutations, (mostly in exon 2), causal to the genesis of uterine leiomyomas among Caucasian, African American, and Asian women. However, the precise relationship between genetic mutations vs. protein or disease phenotype is not wel...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6302612/ https://www.ncbi.nlm.nih.gov/pubmed/30619444 http://dx.doi.org/10.3389/fgene.2018.00552 |
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author | Ajabnoor, Ghada M. A. Mohammed, Nesma Amin Banaganapalli, Babajan Abdullah, Layla Saleh Bondagji, Ola Nabeel Mansouri, Nisma Sahly, Nora Naif Vaidyanathan, Venkatesh Bondagji, Nabeel Elango, Ramu Shaik, Noor Ahmad |
author_facet | Ajabnoor, Ghada M. A. Mohammed, Nesma Amin Banaganapalli, Babajan Abdullah, Layla Saleh Bondagji, Ola Nabeel Mansouri, Nisma Sahly, Nora Naif Vaidyanathan, Venkatesh Bondagji, Nabeel Elango, Ramu Shaik, Noor Ahmad |
author_sort | Ajabnoor, Ghada M. A. |
collection | PubMed |
description | MED12, a subunit of mediator complex genes is known to harbor genetic mutations, (mostly in exon 2), causal to the genesis of uterine leiomyomas among Caucasian, African American, and Asian women. However, the precise relationship between genetic mutations vs. protein or disease phenotype is not well-explained. Therefore, we sought to replicate the MED12 mutation frequency in leiomyomas of Saudi Arabian women, who represents ethnically and culturally distinct population. We performed molecular screening of MED12 gene (in 308 chromosomes belonging to 154 uterine biopsies), analyzed the genotype-disease phenotype correlations and determined the biophysical characteristics of mutated protein through diverse computational approaches. We discovered that >44% (34/77) leiomyomas of Arab women carry a spectrum of MED12 mutations (30 missense, 1 splice site, and 3 indels). In addition to known codon 44, we observed novel somatic mutations in codons 36, 38, and 55. Most genetically mutated tumors (27/30; 90%) demonstrated only one type of genetic change, highlighting that even single allele change in MED12 can have profound impact in transforming the normal uterine myometrium to leiomyomas. An interesting inverse correlation between tumor size and LH is observed when tumor is positive to MED12 mutation (p < 0.05). Our computational investigations suggest that amino acid substitution mutations in exon-2 region of MED12 might contribute to potential alterations in phenotype as well as the stability of MED12 protein. Our study, being the first one from Arab world, confirms the previous findings that somatic MED12 mutations are critical to development and progression of uterine leiomyomas irrespective of the ethnic background. We recommend that mutation screening, particularly codon 44 of MED12 can assist in molecular diagnostics of uterine leiomyomas in majority of the patients. |
format | Online Article Text |
id | pubmed-6302612 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-63026122019-01-07 Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women Ajabnoor, Ghada M. A. Mohammed, Nesma Amin Banaganapalli, Babajan Abdullah, Layla Saleh Bondagji, Ola Nabeel Mansouri, Nisma Sahly, Nora Naif Vaidyanathan, Venkatesh Bondagji, Nabeel Elango, Ramu Shaik, Noor Ahmad Front Genet Genetics MED12, a subunit of mediator complex genes is known to harbor genetic mutations, (mostly in exon 2), causal to the genesis of uterine leiomyomas among Caucasian, African American, and Asian women. However, the precise relationship between genetic mutations vs. protein or disease phenotype is not well-explained. Therefore, we sought to replicate the MED12 mutation frequency in leiomyomas of Saudi Arabian women, who represents ethnically and culturally distinct population. We performed molecular screening of MED12 gene (in 308 chromosomes belonging to 154 uterine biopsies), analyzed the genotype-disease phenotype correlations and determined the biophysical characteristics of mutated protein through diverse computational approaches. We discovered that >44% (34/77) leiomyomas of Arab women carry a spectrum of MED12 mutations (30 missense, 1 splice site, and 3 indels). In addition to known codon 44, we observed novel somatic mutations in codons 36, 38, and 55. Most genetically mutated tumors (27/30; 90%) demonstrated only one type of genetic change, highlighting that even single allele change in MED12 can have profound impact in transforming the normal uterine myometrium to leiomyomas. An interesting inverse correlation between tumor size and LH is observed when tumor is positive to MED12 mutation (p < 0.05). Our computational investigations suggest that amino acid substitution mutations in exon-2 region of MED12 might contribute to potential alterations in phenotype as well as the stability of MED12 protein. Our study, being the first one from Arab world, confirms the previous findings that somatic MED12 mutations are critical to development and progression of uterine leiomyomas irrespective of the ethnic background. We recommend that mutation screening, particularly codon 44 of MED12 can assist in molecular diagnostics of uterine leiomyomas in majority of the patients. Frontiers Media S.A. 2018-12-14 /pmc/articles/PMC6302612/ /pubmed/30619444 http://dx.doi.org/10.3389/fgene.2018.00552 Text en Copyright © 2018 Ajabnoor, Mohammed, Banaganapalli, Abdullah, Bondagji, Mansouri, Sahly, Vaidyanathan, Bondagji, Elango and Shaik. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Ajabnoor, Ghada M. A. Mohammed, Nesma Amin Banaganapalli, Babajan Abdullah, Layla Saleh Bondagji, Ola Nabeel Mansouri, Nisma Sahly, Nora Naif Vaidyanathan, Venkatesh Bondagji, Nabeel Elango, Ramu Shaik, Noor Ahmad Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women |
title | Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women |
title_full | Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women |
title_fullStr | Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women |
title_full_unstemmed | Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women |
title_short | Expanded Somatic Mutation Spectrum of MED12 Gene in Uterine Leiomyomas of Saudi Arabian Women |
title_sort | expanded somatic mutation spectrum of med12 gene in uterine leiomyomas of saudi arabian women |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6302612/ https://www.ncbi.nlm.nih.gov/pubmed/30619444 http://dx.doi.org/10.3389/fgene.2018.00552 |
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