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Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)

PREMISE OF THE STUDY: Novel and cost‐effective microsatellite markers were developed to explore the population genetics, biogeographic structure, and evolutionary history of the prized Euro‐Asian wild edible ectomycorrhizal fungus Tricholoma matsutake (Tricholomataceae). METHODS AND RESULTS: Eightee...

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Detalles Bibliográficos
Autores principales: Li, Jian‐Wen, Yin, Xin, Zhao, You‐Jie, Yang, Shu‐Jiao, Vaario, Lu‐Min, Yang, Xue‐Fei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303152/
https://www.ncbi.nlm.nih.gov/pubmed/30598860
http://dx.doi.org/10.1002/aps3.1202
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author Li, Jian‐Wen
Yin, Xin
Zhao, You‐Jie
Yang, Shu‐Jiao
Vaario, Lu‐Min
Yang, Xue‐Fei
author_facet Li, Jian‐Wen
Yin, Xin
Zhao, You‐Jie
Yang, Shu‐Jiao
Vaario, Lu‐Min
Yang, Xue‐Fei
author_sort Li, Jian‐Wen
collection PubMed
description PREMISE OF THE STUDY: Novel and cost‐effective microsatellite markers were developed to explore the population genetics, biogeographic structure, and evolutionary history of the prized Euro‐Asian wild edible ectomycorrhizal fungus Tricholoma matsutake (Tricholomataceae). METHODS AND RESULTS: Eighteen new polymorphic simple sequence repeat loci, detected from a microsatellite‐enriched genomic library, were used to characterize 131 individuals from eight T. matsutake populations. The number of alleles ranged from two to 10, with averages of 1.42 to 3.22. Levels of observed and expected heterozygosity ranged from 0.00–1.00 and from 0.00–0.83, with mean values of 0.21 and 0.26, respectively. In total, 50% of the loci showed interspecific transferability and polymorphism in the related species T. equestre. CONCLUSIONS: These newly developed markers will aid research into the genetic diversity and population structure of T. matsutake. They can also be used in other species of Tricholoma.
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spelling pubmed-63031522018-12-31 Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) Li, Jian‐Wen Yin, Xin Zhao, You‐Jie Yang, Shu‐Jiao Vaario, Lu‐Min Yang, Xue‐Fei Appl Plant Sci Primer Notes PREMISE OF THE STUDY: Novel and cost‐effective microsatellite markers were developed to explore the population genetics, biogeographic structure, and evolutionary history of the prized Euro‐Asian wild edible ectomycorrhizal fungus Tricholoma matsutake (Tricholomataceae). METHODS AND RESULTS: Eighteen new polymorphic simple sequence repeat loci, detected from a microsatellite‐enriched genomic library, were used to characterize 131 individuals from eight T. matsutake populations. The number of alleles ranged from two to 10, with averages of 1.42 to 3.22. Levels of observed and expected heterozygosity ranged from 0.00–1.00 and from 0.00–0.83, with mean values of 0.21 and 0.26, respectively. In total, 50% of the loci showed interspecific transferability and polymorphism in the related species T. equestre. CONCLUSIONS: These newly developed markers will aid research into the genetic diversity and population structure of T. matsutake. They can also be used in other species of Tricholoma. John Wiley and Sons Inc. 2018-12-10 /pmc/articles/PMC6303152/ /pubmed/30598860 http://dx.doi.org/10.1002/aps3.1202 Text en © 2018 Li et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Primer Notes
Li, Jian‐Wen
Yin, Xin
Zhao, You‐Jie
Yang, Shu‐Jiao
Vaario, Lu‐Min
Yang, Xue‐Fei
Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)
title Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)
title_full Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)
title_fullStr Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)
title_full_unstemmed Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)
title_short Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)
title_sort microsatellite markers for the prized matsutake mushroom (tricholoma matsutake, tricholomataceae)
topic Primer Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303152/
https://www.ncbi.nlm.nih.gov/pubmed/30598860
http://dx.doi.org/10.1002/aps3.1202
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