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Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae)
PREMISE OF THE STUDY: Novel and cost‐effective microsatellite markers were developed to explore the population genetics, biogeographic structure, and evolutionary history of the prized Euro‐Asian wild edible ectomycorrhizal fungus Tricholoma matsutake (Tricholomataceae). METHODS AND RESULTS: Eightee...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303152/ https://www.ncbi.nlm.nih.gov/pubmed/30598860 http://dx.doi.org/10.1002/aps3.1202 |
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author | Li, Jian‐Wen Yin, Xin Zhao, You‐Jie Yang, Shu‐Jiao Vaario, Lu‐Min Yang, Xue‐Fei |
author_facet | Li, Jian‐Wen Yin, Xin Zhao, You‐Jie Yang, Shu‐Jiao Vaario, Lu‐Min Yang, Xue‐Fei |
author_sort | Li, Jian‐Wen |
collection | PubMed |
description | PREMISE OF THE STUDY: Novel and cost‐effective microsatellite markers were developed to explore the population genetics, biogeographic structure, and evolutionary history of the prized Euro‐Asian wild edible ectomycorrhizal fungus Tricholoma matsutake (Tricholomataceae). METHODS AND RESULTS: Eighteen new polymorphic simple sequence repeat loci, detected from a microsatellite‐enriched genomic library, were used to characterize 131 individuals from eight T. matsutake populations. The number of alleles ranged from two to 10, with averages of 1.42 to 3.22. Levels of observed and expected heterozygosity ranged from 0.00–1.00 and from 0.00–0.83, with mean values of 0.21 and 0.26, respectively. In total, 50% of the loci showed interspecific transferability and polymorphism in the related species T. equestre. CONCLUSIONS: These newly developed markers will aid research into the genetic diversity and population structure of T. matsutake. They can also be used in other species of Tricholoma. |
format | Online Article Text |
id | pubmed-6303152 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-63031522018-12-31 Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) Li, Jian‐Wen Yin, Xin Zhao, You‐Jie Yang, Shu‐Jiao Vaario, Lu‐Min Yang, Xue‐Fei Appl Plant Sci Primer Notes PREMISE OF THE STUDY: Novel and cost‐effective microsatellite markers were developed to explore the population genetics, biogeographic structure, and evolutionary history of the prized Euro‐Asian wild edible ectomycorrhizal fungus Tricholoma matsutake (Tricholomataceae). METHODS AND RESULTS: Eighteen new polymorphic simple sequence repeat loci, detected from a microsatellite‐enriched genomic library, were used to characterize 131 individuals from eight T. matsutake populations. The number of alleles ranged from two to 10, with averages of 1.42 to 3.22. Levels of observed and expected heterozygosity ranged from 0.00–1.00 and from 0.00–0.83, with mean values of 0.21 and 0.26, respectively. In total, 50% of the loci showed interspecific transferability and polymorphism in the related species T. equestre. CONCLUSIONS: These newly developed markers will aid research into the genetic diversity and population structure of T. matsutake. They can also be used in other species of Tricholoma. John Wiley and Sons Inc. 2018-12-10 /pmc/articles/PMC6303152/ /pubmed/30598860 http://dx.doi.org/10.1002/aps3.1202 Text en © 2018 Li et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Primer Notes Li, Jian‐Wen Yin, Xin Zhao, You‐Jie Yang, Shu‐Jiao Vaario, Lu‐Min Yang, Xue‐Fei Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) |
title | Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) |
title_full | Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) |
title_fullStr | Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) |
title_full_unstemmed | Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) |
title_short | Microsatellite markers for the prized matsutake mushroom (Tricholoma matsutake, Tricholomataceae) |
title_sort | microsatellite markers for the prized matsutake mushroom (tricholoma matsutake, tricholomataceae) |
topic | Primer Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303152/ https://www.ncbi.nlm.nih.gov/pubmed/30598860 http://dx.doi.org/10.1002/aps3.1202 |
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