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Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters

Abstract. Multilocus phylogenetic studies revealed a high level of cryptic diversity within the lichen-forming fungal genus Maronina (Protoparmelioideae, Parmeliaceae). Coalescent-based species delimitation suggested that most of the cryptic molecular lineages warranted recognition as separate speci...

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Autores principales: Singh, Garima, ptroot, André, ico, Víctor J., tte, Jürgen, Pradeep K. Divakar, Crespo, Ana, Cáceres, Marcela Eugenia da Silva, H. Thorsten Lumbsch, Schmitt, Imke
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303283/
https://www.ncbi.nlm.nih.gov/pubmed/30595656
http://dx.doi.org/10.3897/mycokeys.44.29904
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author Singh, Garima
ptroot, André
ico, Víctor J.
tte, Jürgen
Pradeep K. Divakar,
Crespo, Ana
Cáceres, Marcela Eugenia da Silva
H. Thorsten Lumbsch,
Schmitt, Imke
author_facet Singh, Garima
ptroot, André
ico, Víctor J.
tte, Jürgen
Pradeep K. Divakar,
Crespo, Ana
Cáceres, Marcela Eugenia da Silva
H. Thorsten Lumbsch,
Schmitt, Imke
author_sort Singh, Garima
collection PubMed
description Abstract. Multilocus phylogenetic studies revealed a high level of cryptic diversity within the lichen-forming fungal genus Maronina (Protoparmelioideae, Parmeliaceae). Coalescent-based species delimitation suggested that most of the cryptic molecular lineages warranted recognition as separate species. Here we study the morphology and chemistry of these taxa and formally describe eight new species based on phenotypical and molecular characters. Further, we evaluate the use of ITS rDNA as a DNA barcode for identifying species in this genus. For the first time, we obtained an ITS sequence of Maroninaaustraliensis, the type species of the genus and showed that it is phylogenetically not closely related to species currently placed in Maronina or Protoparmelia. We assembled a dataset of 66 ITS sequences to assess the interspecies genetic distances amongst the twelve Maronina species using ITS as DNA barcode. We found that Maronina and Protoparmelia form a supported monophyletic group whereas M.australiensis is sister to both. We therefore propose a new genus Neoprotoparmelia to accommodate the tropical-subtropical species within Protoparmelioideae, with Neoprotoparmeliacorallifera as the type, N.amerisidiata, N.australisidiata, N.brasilisidiata, N.capensis, N.crassa, N.pauli, N.plurisporibadia and N.siamisidiata as new species and N.capitata, N.isidiata, N.multifera, N.orientalis and N.pulchra as new proposed combinations. We provide a key to Neoprotoparmelia and confirm the use of ITS for accurately identifying species in this group.
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spelling pubmed-63032832018-12-28 Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters Singh, Garima ptroot, André ico, Víctor J. tte, Jürgen Pradeep K. Divakar, Crespo, Ana Cáceres, Marcela Eugenia da Silva H. Thorsten Lumbsch, Schmitt, Imke MycoKeys Research Article Abstract. Multilocus phylogenetic studies revealed a high level of cryptic diversity within the lichen-forming fungal genus Maronina (Protoparmelioideae, Parmeliaceae). Coalescent-based species delimitation suggested that most of the cryptic molecular lineages warranted recognition as separate species. Here we study the morphology and chemistry of these taxa and formally describe eight new species based on phenotypical and molecular characters. Further, we evaluate the use of ITS rDNA as a DNA barcode for identifying species in this genus. For the first time, we obtained an ITS sequence of Maroninaaustraliensis, the type species of the genus and showed that it is phylogenetically not closely related to species currently placed in Maronina or Protoparmelia. We assembled a dataset of 66 ITS sequences to assess the interspecies genetic distances amongst the twelve Maronina species using ITS as DNA barcode. We found that Maronina and Protoparmelia form a supported monophyletic group whereas M.australiensis is sister to both. We therefore propose a new genus Neoprotoparmelia to accommodate the tropical-subtropical species within Protoparmelioideae, with Neoprotoparmeliacorallifera as the type, N.amerisidiata, N.australisidiata, N.brasilisidiata, N.capensis, N.crassa, N.pauli, N.plurisporibadia and N.siamisidiata as new species and N.capitata, N.isidiata, N.multifera, N.orientalis and N.pulchra as new proposed combinations. We provide a key to Neoprotoparmelia and confirm the use of ITS for accurately identifying species in this group. Pensoft Publishers 2018-12-14 /pmc/articles/PMC6303283/ /pubmed/30595656 http://dx.doi.org/10.3897/mycokeys.44.29904 Text en Garima Singh, André ptroot, Víctor J. ico, Jürgen tte, Pradeep K. Divakar, Ana Crespo, Marcela Eugenia da Silva Cáceres, H. Thorsten Lumbsch, Imke Schmitt http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Singh, Garima
ptroot, André
ico, Víctor J.
tte, Jürgen
Pradeep K. Divakar,
Crespo, Ana
Cáceres, Marcela Eugenia da Silva
H. Thorsten Lumbsch,
Schmitt, Imke
Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters
title Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters
title_full Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters
title_fullStr Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters
title_full_unstemmed Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters
title_short Neoprotoparmelia gen. nov. and Maronina (Lecanorales, Protoparmelioideae): species description and generic delimitation using DNA barcodes and phenotypical characters
title_sort neoprotoparmelia gen. nov. and maronina (lecanorales, protoparmelioideae): species description and generic delimitation using dna barcodes and phenotypical characters
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303283/
https://www.ncbi.nlm.nih.gov/pubmed/30595656
http://dx.doi.org/10.3897/mycokeys.44.29904
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