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Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya

AIM: Prosopis spp. are an invasive alien plant species native to the Americas and well adapted to thrive in arid environments. In Kenya, several remote‐sensing studies conclude that the genus is well established throughout the country and is rapidly invading new areas. This research aims to model th...

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Autores principales: Ng, Wai‐Tim, Cândido de Oliveira Silva, Alexsandro, Rima, Purity, Atzberger, Clement, Immitzer, Markus
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303778/
https://www.ncbi.nlm.nih.gov/pubmed/30598787
http://dx.doi.org/10.1002/ece3.4649
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author Ng, Wai‐Tim
Cândido de Oliveira Silva, Alexsandro
Rima, Purity
Atzberger, Clement
Immitzer, Markus
author_facet Ng, Wai‐Tim
Cândido de Oliveira Silva, Alexsandro
Rima, Purity
Atzberger, Clement
Immitzer, Markus
author_sort Ng, Wai‐Tim
collection PubMed
description AIM: Prosopis spp. are an invasive alien plant species native to the Americas and well adapted to thrive in arid environments. In Kenya, several remote‐sensing studies conclude that the genus is well established throughout the country and is rapidly invading new areas. This research aims to model the potential habitat of Prosopis spp. by using an ensemble model consisting of four species distribution models. Furthermore, environmental and expert knowledge‐based variables are assessed. LOCATION: Turkana County, Kenya. METHODS: We collected and assessed a large number of environmental and expert knowledge‐based variables through variable correlation, collinearity, and bias tests. The variables were used for an ensemble model consisting of four species distribution models: (a) logistic regression, (b) maximum entropy, (c) random forest, and (d) Bayesian networks. The models were evaluated through a block cross‐validation providing statistical measures. RESULTS: The best predictors for Prosopis spp. habitat are distance from water and built‐up areas, soil type, elevation, lithology, and temperature seasonality. All species distribution models achieved high accuracies while the ensemble model achieved the highest scores. Highly and moderately suitable Prosopis spp. habitat covers 6% and 9% of the study area, respectively. MAIN CONCLUSIONS: Both ensemble and individual models predict a high risk of continued invasion, confirming local observations and conceptions. Findings are valuable to stakeholders for managing invaded area, protecting areas at risk, and to raise awareness.
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spelling pubmed-63037782018-12-31 Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya Ng, Wai‐Tim Cândido de Oliveira Silva, Alexsandro Rima, Purity Atzberger, Clement Immitzer, Markus Ecol Evol Original Research AIM: Prosopis spp. are an invasive alien plant species native to the Americas and well adapted to thrive in arid environments. In Kenya, several remote‐sensing studies conclude that the genus is well established throughout the country and is rapidly invading new areas. This research aims to model the potential habitat of Prosopis spp. by using an ensemble model consisting of four species distribution models. Furthermore, environmental and expert knowledge‐based variables are assessed. LOCATION: Turkana County, Kenya. METHODS: We collected and assessed a large number of environmental and expert knowledge‐based variables through variable correlation, collinearity, and bias tests. The variables were used for an ensemble model consisting of four species distribution models: (a) logistic regression, (b) maximum entropy, (c) random forest, and (d) Bayesian networks. The models were evaluated through a block cross‐validation providing statistical measures. RESULTS: The best predictors for Prosopis spp. habitat are distance from water and built‐up areas, soil type, elevation, lithology, and temperature seasonality. All species distribution models achieved high accuracies while the ensemble model achieved the highest scores. Highly and moderately suitable Prosopis spp. habitat covers 6% and 9% of the study area, respectively. MAIN CONCLUSIONS: Both ensemble and individual models predict a high risk of continued invasion, confirming local observations and conceptions. Findings are valuable to stakeholders for managing invaded area, protecting areas at risk, and to raise awareness. John Wiley and Sons Inc. 2018-11-21 /pmc/articles/PMC6303778/ /pubmed/30598787 http://dx.doi.org/10.1002/ece3.4649 Text en © 2018 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Ng, Wai‐Tim
Cândido de Oliveira Silva, Alexsandro
Rima, Purity
Atzberger, Clement
Immitzer, Markus
Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya
title Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya
title_full Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya
title_fullStr Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya
title_full_unstemmed Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya
title_short Ensemble approach for potential habitat mapping of invasive Prosopis spp. in Turkana, Kenya
title_sort ensemble approach for potential habitat mapping of invasive prosopis spp. in turkana, kenya
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303778/
https://www.ncbi.nlm.nih.gov/pubmed/30598787
http://dx.doi.org/10.1002/ece3.4649
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