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Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population

BACKGROUND: Ossification of the posterior longitudinal ligament (OPLL) of the spine is a complex, multifactorial disease. Although several genes that are linked to cervical OPLL susceptibility have been reported, specific genetic studies regarding thoracic OPLL are lacking. Whole-genome sequencing h...

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Autores principales: Liang, Chen, Wang, Peng, Liu, Xiao, Yang, Chenlong, Ma, Yunlong, Yong, Lei, Zhu, Bin, Liu, Xiaoguang, Liu, Zhongjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303868/
https://www.ncbi.nlm.nih.gov/pubmed/30577800
http://dx.doi.org/10.1186/s13018-018-1022-8
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author Liang, Chen
Wang, Peng
Liu, Xiao
Yang, Chenlong
Ma, Yunlong
Yong, Lei
Zhu, Bin
Liu, Xiaoguang
Liu, Zhongjun
author_facet Liang, Chen
Wang, Peng
Liu, Xiao
Yang, Chenlong
Ma, Yunlong
Yong, Lei
Zhu, Bin
Liu, Xiaoguang
Liu, Zhongjun
author_sort Liang, Chen
collection PubMed
description BACKGROUND: Ossification of the posterior longitudinal ligament (OPLL) of the spine is a complex, multifactorial disease. Although several genes that are linked to cervical OPLL susceptibility have been reported, specific genetic studies regarding thoracic OPLL are lacking. Whole-genome sequencing has been considered as an efficient strategy to search for disease-causing genes. METHODS: We analysed whole-genome sequences in a cohort of 25 unrelated patients with thoracic OPLL. Bioinformatics analysis and various algorithms were used to predict deleterious variants. Sanger sequencing was used to confirm the variants. RESULTS: Four deleterious mutations in three genes (c.2716C>T (p.Arg906Cys) in collagen type VI α6 (COL6A6); c.1946G>C (p.Gly649Ala) in collagen type IX α1 (COL9A1); and c.301T>C (p.Ser101Pro) and c.171A>G (p.Ile57Met) in toll-like receptor 1 (TLR1)) were successfully identified. All the variants were confirmed by Sanger sequencing. CONCLUSION: The novel deleterious mutations of the three genes may contribute to the development of thoracic OPLL.
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spelling pubmed-63038682018-12-31 Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population Liang, Chen Wang, Peng Liu, Xiao Yang, Chenlong Ma, Yunlong Yong, Lei Zhu, Bin Liu, Xiaoguang Liu, Zhongjun J Orthop Surg Res Research Article BACKGROUND: Ossification of the posterior longitudinal ligament (OPLL) of the spine is a complex, multifactorial disease. Although several genes that are linked to cervical OPLL susceptibility have been reported, specific genetic studies regarding thoracic OPLL are lacking. Whole-genome sequencing has been considered as an efficient strategy to search for disease-causing genes. METHODS: We analysed whole-genome sequences in a cohort of 25 unrelated patients with thoracic OPLL. Bioinformatics analysis and various algorithms were used to predict deleterious variants. Sanger sequencing was used to confirm the variants. RESULTS: Four deleterious mutations in three genes (c.2716C>T (p.Arg906Cys) in collagen type VI α6 (COL6A6); c.1946G>C (p.Gly649Ala) in collagen type IX α1 (COL9A1); and c.301T>C (p.Ser101Pro) and c.171A>G (p.Ile57Met) in toll-like receptor 1 (TLR1)) were successfully identified. All the variants were confirmed by Sanger sequencing. CONCLUSION: The novel deleterious mutations of the three genes may contribute to the development of thoracic OPLL. BioMed Central 2018-12-22 /pmc/articles/PMC6303868/ /pubmed/30577800 http://dx.doi.org/10.1186/s13018-018-1022-8 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Liang, Chen
Wang, Peng
Liu, Xiao
Yang, Chenlong
Ma, Yunlong
Yong, Lei
Zhu, Bin
Liu, Xiaoguang
Liu, Zhongjun
Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population
title Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population
title_full Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population
title_fullStr Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population
title_full_unstemmed Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population
title_short Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population
title_sort whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the chinese population
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303868/
https://www.ncbi.nlm.nih.gov/pubmed/30577800
http://dx.doi.org/10.1186/s13018-018-1022-8
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