Cargando…
Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population
BACKGROUND: Ossification of the posterior longitudinal ligament (OPLL) of the spine is a complex, multifactorial disease. Although several genes that are linked to cervical OPLL susceptibility have been reported, specific genetic studies regarding thoracic OPLL are lacking. Whole-genome sequencing h...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303868/ https://www.ncbi.nlm.nih.gov/pubmed/30577800 http://dx.doi.org/10.1186/s13018-018-1022-8 |
_version_ | 1783382244960763904 |
---|---|
author | Liang, Chen Wang, Peng Liu, Xiao Yang, Chenlong Ma, Yunlong Yong, Lei Zhu, Bin Liu, Xiaoguang Liu, Zhongjun |
author_facet | Liang, Chen Wang, Peng Liu, Xiao Yang, Chenlong Ma, Yunlong Yong, Lei Zhu, Bin Liu, Xiaoguang Liu, Zhongjun |
author_sort | Liang, Chen |
collection | PubMed |
description | BACKGROUND: Ossification of the posterior longitudinal ligament (OPLL) of the spine is a complex, multifactorial disease. Although several genes that are linked to cervical OPLL susceptibility have been reported, specific genetic studies regarding thoracic OPLL are lacking. Whole-genome sequencing has been considered as an efficient strategy to search for disease-causing genes. METHODS: We analysed whole-genome sequences in a cohort of 25 unrelated patients with thoracic OPLL. Bioinformatics analysis and various algorithms were used to predict deleterious variants. Sanger sequencing was used to confirm the variants. RESULTS: Four deleterious mutations in three genes (c.2716C>T (p.Arg906Cys) in collagen type VI α6 (COL6A6); c.1946G>C (p.Gly649Ala) in collagen type IX α1 (COL9A1); and c.301T>C (p.Ser101Pro) and c.171A>G (p.Ile57Met) in toll-like receptor 1 (TLR1)) were successfully identified. All the variants were confirmed by Sanger sequencing. CONCLUSION: The novel deleterious mutations of the three genes may contribute to the development of thoracic OPLL. |
format | Online Article Text |
id | pubmed-6303868 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-63038682018-12-31 Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population Liang, Chen Wang, Peng Liu, Xiao Yang, Chenlong Ma, Yunlong Yong, Lei Zhu, Bin Liu, Xiaoguang Liu, Zhongjun J Orthop Surg Res Research Article BACKGROUND: Ossification of the posterior longitudinal ligament (OPLL) of the spine is a complex, multifactorial disease. Although several genes that are linked to cervical OPLL susceptibility have been reported, specific genetic studies regarding thoracic OPLL are lacking. Whole-genome sequencing has been considered as an efficient strategy to search for disease-causing genes. METHODS: We analysed whole-genome sequences in a cohort of 25 unrelated patients with thoracic OPLL. Bioinformatics analysis and various algorithms were used to predict deleterious variants. Sanger sequencing was used to confirm the variants. RESULTS: Four deleterious mutations in three genes (c.2716C>T (p.Arg906Cys) in collagen type VI α6 (COL6A6); c.1946G>C (p.Gly649Ala) in collagen type IX α1 (COL9A1); and c.301T>C (p.Ser101Pro) and c.171A>G (p.Ile57Met) in toll-like receptor 1 (TLR1)) were successfully identified. All the variants were confirmed by Sanger sequencing. CONCLUSION: The novel deleterious mutations of the three genes may contribute to the development of thoracic OPLL. BioMed Central 2018-12-22 /pmc/articles/PMC6303868/ /pubmed/30577800 http://dx.doi.org/10.1186/s13018-018-1022-8 Text en © The Author(s). 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Liang, Chen Wang, Peng Liu, Xiao Yang, Chenlong Ma, Yunlong Yong, Lei Zhu, Bin Liu, Xiaoguang Liu, Zhongjun Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population |
title | Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population |
title_full | Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population |
title_fullStr | Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population |
title_full_unstemmed | Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population |
title_short | Whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the Chinese population |
title_sort | whole-genome sequencing reveals novel genes in ossification of the posterior longitudinal ligament of the thoracic spine in the chinese population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6303868/ https://www.ncbi.nlm.nih.gov/pubmed/30577800 http://dx.doi.org/10.1186/s13018-018-1022-8 |
work_keys_str_mv | AT liangchen wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT wangpeng wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT liuxiao wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT yangchenlong wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT mayunlong wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT yonglei wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT zhubin wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT liuxiaoguang wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation AT liuzhongjun wholegenomesequencingrevealsnovelgenesinossificationoftheposteriorlongitudinalligamentofthethoracicspineinthechinesepopulation |