Cargando…
Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount
Rock outcrops of aged deep-sea seamounts are generally covered with Fe and Mn oxides, known as ferromanganese (Fe–Mn) crusts. Although the presence of microorganisms in Fe–Mn crusts has been reported, limited information is currently available on intra- and inter-variations in crust microbial commun...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI)
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6307992/ https://www.ncbi.nlm.nih.gov/pubmed/30381615 http://dx.doi.org/10.1264/jsme2.ME18090 |
_version_ | 1783383099474706432 |
---|---|
author | Kato, Shingo Okumura, Tomoyo Uematsu, Katsuyuki Hirai, Miho Iijima, Koichi Usui, Akira Suzuki, Katsuhiko |
author_facet | Kato, Shingo Okumura, Tomoyo Uematsu, Katsuyuki Hirai, Miho Iijima, Koichi Usui, Akira Suzuki, Katsuhiko |
author_sort | Kato, Shingo |
collection | PubMed |
description | Rock outcrops of aged deep-sea seamounts are generally covered with Fe and Mn oxides, known as ferromanganese (Fe–Mn) crusts. Although the presence of microorganisms in Fe–Mn crusts has been reported, limited information is currently available on intra- and inter-variations in crust microbial communities. Therefore, we collected several Fe–Mn crusts in bathyal and abyssal zones (water depths of 1,150–5,520 m) in the Takuyo-Daigo Seamount in the northwestern Pacific, and examined microbial communities on the crusts using culture-independent molecular and microscopic analyses. Quantitative PCR showed that microbial cells were abundant (10(6)–10(8) cells g(−1)) on Fe–Mn crust surfaces through the water depths. A comparative 16S rRNA gene analysis revealed community differences among Fe–Mn crusts through the water depths, which may have been caused by changes in dissolved oxygen concentrations. Moreover, community differences were observed among positions within each Fe–Mn crust, and potentially depended on the availability of sinking particulate organic matter. Microscopic and elemental analyses of thin Fe–Mn crust sections revealed the accumulation of microbial cells accompanied by the depletion of Mn in valleys of bumpy crust surfaces. Our results suggest that heterogeneous and abundant microbial communities play a role in the biogeochemical cycling of Mn, in addition to C and N, on crusts and contribute to the extremely slow growth of Fe–Mn crusts. |
format | Online Article Text |
id | pubmed-6307992 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) |
record_format | MEDLINE/PubMed |
spelling | pubmed-63079922019-01-02 Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount Kato, Shingo Okumura, Tomoyo Uematsu, Katsuyuki Hirai, Miho Iijima, Koichi Usui, Akira Suzuki, Katsuhiko Microbes Environ Articles Rock outcrops of aged deep-sea seamounts are generally covered with Fe and Mn oxides, known as ferromanganese (Fe–Mn) crusts. Although the presence of microorganisms in Fe–Mn crusts has been reported, limited information is currently available on intra- and inter-variations in crust microbial communities. Therefore, we collected several Fe–Mn crusts in bathyal and abyssal zones (water depths of 1,150–5,520 m) in the Takuyo-Daigo Seamount in the northwestern Pacific, and examined microbial communities on the crusts using culture-independent molecular and microscopic analyses. Quantitative PCR showed that microbial cells were abundant (10(6)–10(8) cells g(−1)) on Fe–Mn crust surfaces through the water depths. A comparative 16S rRNA gene analysis revealed community differences among Fe–Mn crusts through the water depths, which may have been caused by changes in dissolved oxygen concentrations. Moreover, community differences were observed among positions within each Fe–Mn crust, and potentially depended on the availability of sinking particulate organic matter. Microscopic and elemental analyses of thin Fe–Mn crust sections revealed the accumulation of microbial cells accompanied by the depletion of Mn in valleys of bumpy crust surfaces. Our results suggest that heterogeneous and abundant microbial communities play a role in the biogeochemical cycling of Mn, in addition to C and N, on crusts and contribute to the extremely slow growth of Fe–Mn crusts. the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2018-12 2018-10-30 /pmc/articles/PMC6307992/ /pubmed/30381615 http://dx.doi.org/10.1264/jsme2.ME18090 Text en Copyright © 2018 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Articles Kato, Shingo Okumura, Tomoyo Uematsu, Katsuyuki Hirai, Miho Iijima, Koichi Usui, Akira Suzuki, Katsuhiko Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount |
title | Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount |
title_full | Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount |
title_fullStr | Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount |
title_full_unstemmed | Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount |
title_short | Heterogeneity of Microbial Communities on Deep-Sea Ferromanganese Crusts in the Takuyo-Daigo Seamount |
title_sort | heterogeneity of microbial communities on deep-sea ferromanganese crusts in the takuyo-daigo seamount |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6307992/ https://www.ncbi.nlm.nih.gov/pubmed/30381615 http://dx.doi.org/10.1264/jsme2.ME18090 |
work_keys_str_mv | AT katoshingo heterogeneityofmicrobialcommunitiesondeepseaferromanganesecrustsinthetakuyodaigoseamount AT okumuratomoyo heterogeneityofmicrobialcommunitiesondeepseaferromanganesecrustsinthetakuyodaigoseamount AT uematsukatsuyuki heterogeneityofmicrobialcommunitiesondeepseaferromanganesecrustsinthetakuyodaigoseamount AT hiraimiho heterogeneityofmicrobialcommunitiesondeepseaferromanganesecrustsinthetakuyodaigoseamount AT iijimakoichi heterogeneityofmicrobialcommunitiesondeepseaferromanganesecrustsinthetakuyodaigoseamount AT usuiakira heterogeneityofmicrobialcommunitiesondeepseaferromanganesecrustsinthetakuyodaigoseamount AT suzukikatsuhiko heterogeneityofmicrobialcommunitiesondeepseaferromanganesecrustsinthetakuyodaigoseamount |