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EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators

The emerging field of bioelectricity has revealed numerous new roles for ion channels beyond the nervous system, which can be exploited for applications in regenerative medicine. Developing such biomedical interventions for birth defects, cancer, traumatic injury, and bioengineering first requires k...

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Detalles Bibliográficos
Autores principales: Churchill, Cassandra D.M., Winter, Philip, Tuszynski, Jack A., Levin, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6308252/
https://www.ncbi.nlm.nih.gov/pubmed/30590250
http://dx.doi.org/10.1016/j.isci.2018.12.003
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author Churchill, Cassandra D.M.
Winter, Philip
Tuszynski, Jack A.
Levin, Michael
author_facet Churchill, Cassandra D.M.
Winter, Philip
Tuszynski, Jack A.
Levin, Michael
author_sort Churchill, Cassandra D.M.
collection PubMed
description The emerging field of bioelectricity has revealed numerous new roles for ion channels beyond the nervous system, which can be exploited for applications in regenerative medicine. Developing such biomedical interventions for birth defects, cancer, traumatic injury, and bioengineering first requires knowledge of ion channel targets expressed in tissues of interest. This information can then be used to select combinations of small molecule inhibitors and/or activators that manipulate the bioelectric state. Here, we provide an overview of electroceutical design environment (EDEn), the first bioinformatic platform that facilitates the design of such therapeutic strategies. This database includes information on ion channels and ion pumps, linked to known chemical modulators and their properties. The database also provides information about the expression levels of the ion channels in over 100 tissue types. The graphical interface allows the user to readily identify chemical entities that can alter the electrical properties of target cells and tissues.
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spelling pubmed-63082522018-12-28 EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators Churchill, Cassandra D.M. Winter, Philip Tuszynski, Jack A. Levin, Michael iScience Article The emerging field of bioelectricity has revealed numerous new roles for ion channels beyond the nervous system, which can be exploited for applications in regenerative medicine. Developing such biomedical interventions for birth defects, cancer, traumatic injury, and bioengineering first requires knowledge of ion channel targets expressed in tissues of interest. This information can then be used to select combinations of small molecule inhibitors and/or activators that manipulate the bioelectric state. Here, we provide an overview of electroceutical design environment (EDEn), the first bioinformatic platform that facilitates the design of such therapeutic strategies. This database includes information on ion channels and ion pumps, linked to known chemical modulators and their properties. The database also provides information about the expression levels of the ion channels in over 100 tissue types. The graphical interface allows the user to readily identify chemical entities that can alter the electrical properties of target cells and tissues. Elsevier 2018-12-11 /pmc/articles/PMC6308252/ /pubmed/30590250 http://dx.doi.org/10.1016/j.isci.2018.12.003 Text en © 2018 Tufts University http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Churchill, Cassandra D.M.
Winter, Philip
Tuszynski, Jack A.
Levin, Michael
EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators
title EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators
title_full EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators
title_fullStr EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators
title_full_unstemmed EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators
title_short EDEn–Electroceutical Design Environment: Ion Channel Tissue Expression Database with Small Molecule Modulators
title_sort eden–electroceutical design environment: ion channel tissue expression database with small molecule modulators
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6308252/
https://www.ncbi.nlm.nih.gov/pubmed/30590250
http://dx.doi.org/10.1016/j.isci.2018.12.003
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