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Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees

The data analysis of visible-near infrared (Vis-NIR) spectroscopy is critical for precise information extraction and prediction of fiber morphology. The objectives of this study were to discuss the de-noising of Vis-NIR spectra, taken from wood, to improve the prediction accuracy of tracheid length...

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Autores principales: Li, Ying, Via, Brian K., Cheng, Qingzheng, Li, Yaoxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6308962/
https://www.ncbi.nlm.nih.gov/pubmed/30563264
http://dx.doi.org/10.3390/s18124306
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author Li, Ying
Via, Brian K.
Cheng, Qingzheng
Li, Yaoxiang
author_facet Li, Ying
Via, Brian K.
Cheng, Qingzheng
Li, Yaoxiang
author_sort Li, Ying
collection PubMed
description The data analysis of visible-near infrared (Vis-NIR) spectroscopy is critical for precise information extraction and prediction of fiber morphology. The objectives of this study were to discuss the de-noising of Vis-NIR spectra, taken from wood, to improve the prediction accuracy of tracheid length in Dahurian larch wood. Methods based on lifting wavelet transform (LWT) and local correlation maximization (LCM) algorithms were developed for optimal de-noising parameters and partial least squares (PLS) was employed as the prediction method. The results showed that: (1) The values of tracheid length in the study were generally high and had a great positive linear correlation with annual rings (R = 0.881), (2) the optimal de-noising parameters for larch wood based Vis-NIR spectra were Daubechies-2 (db2) mother wavelet with 4 decomposition levels while using a global fixed hard threshold based on LWT, and (3) the Vis-NIR model based on the optimal LWT de-noising parameters ([Formula: see text] = 0.834, [Formula: see text] = 0.262, [Formula: see text] = 2.454) outperformed those based on the LWT coupled with LCM algorithm (LWT-LCM) ([Formula: see text] = 0.816, [Formula: see text] = 0.276, [Formula: see text] = 2.331) and raw spectra ([Formula: see text] = 0.822, [Formula: see text] = 0.271, [Formula: see text] = 2.370). Thus, the selection of appropriate LWT de-noising parameters could aid in extracting a useful signal for better prediction accuracy of tracheid length.
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spelling pubmed-63089622019-01-04 Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees Li, Ying Via, Brian K. Cheng, Qingzheng Li, Yaoxiang Sensors (Basel) Article The data analysis of visible-near infrared (Vis-NIR) spectroscopy is critical for precise information extraction and prediction of fiber morphology. The objectives of this study were to discuss the de-noising of Vis-NIR spectra, taken from wood, to improve the prediction accuracy of tracheid length in Dahurian larch wood. Methods based on lifting wavelet transform (LWT) and local correlation maximization (LCM) algorithms were developed for optimal de-noising parameters and partial least squares (PLS) was employed as the prediction method. The results showed that: (1) The values of tracheid length in the study were generally high and had a great positive linear correlation with annual rings (R = 0.881), (2) the optimal de-noising parameters for larch wood based Vis-NIR spectra were Daubechies-2 (db2) mother wavelet with 4 decomposition levels while using a global fixed hard threshold based on LWT, and (3) the Vis-NIR model based on the optimal LWT de-noising parameters ([Formula: see text] = 0.834, [Formula: see text] = 0.262, [Formula: see text] = 2.454) outperformed those based on the LWT coupled with LCM algorithm (LWT-LCM) ([Formula: see text] = 0.816, [Formula: see text] = 0.276, [Formula: see text] = 2.331) and raw spectra ([Formula: see text] = 0.822, [Formula: see text] = 0.271, [Formula: see text] = 2.370). Thus, the selection of appropriate LWT de-noising parameters could aid in extracting a useful signal for better prediction accuracy of tracheid length. MDPI 2018-12-06 /pmc/articles/PMC6308962/ /pubmed/30563264 http://dx.doi.org/10.3390/s18124306 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Li, Ying
Via, Brian K.
Cheng, Qingzheng
Li, Yaoxiang
Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees
title Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees
title_full Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees
title_fullStr Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees
title_full_unstemmed Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees
title_short Lifting Wavelet Transform De-noising for Model Optimization of Vis-NIR Spectroscopy to Predict Wood Tracheid Length in Trees
title_sort lifting wavelet transform de-noising for model optimization of vis-nir spectroscopy to predict wood tracheid length in trees
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6308962/
https://www.ncbi.nlm.nih.gov/pubmed/30563264
http://dx.doi.org/10.3390/s18124306
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AT chengqingzheng liftingwavelettransformdenoisingformodeloptimizationofvisnirspectroscopytopredictwoodtracheidlengthintrees
AT liyaoxiang liftingwavelettransformdenoisingformodeloptimizationofvisnirspectroscopytopredictwoodtracheidlengthintrees