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Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach
Ischemic stroke is accompanied by high mortality and morbidity rates. At present, there is no effective clinical treatment. Alternatively, traditional Chinese medicine has been widely used in China and Japan for the treatment of ischemic stroke. Baicalin is a flavonoid extracted from Scutellaria bai...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6311886/ https://www.ncbi.nlm.nih.gov/pubmed/30647760 http://dx.doi.org/10.1155/2018/2582843 |
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author | Xu, Tian Ma, Chongyang Fan, Shuning Deng, Nang Lian, Yajun Tan, Ling Du, Weizhe Zhang, Shuang Liu, Shuling Ren, Beida Li, Zhenhan Wang, Qinguo Wang, Xueqian Cheng, Fafeng |
author_facet | Xu, Tian Ma, Chongyang Fan, Shuning Deng, Nang Lian, Yajun Tan, Ling Du, Weizhe Zhang, Shuang Liu, Shuling Ren, Beida Li, Zhenhan Wang, Qinguo Wang, Xueqian Cheng, Fafeng |
author_sort | Xu, Tian |
collection | PubMed |
description | Ischemic stroke is accompanied by high mortality and morbidity rates. At present, there is no effective clinical treatment. Alternatively, traditional Chinese medicine has been widely used in China and Japan for the treatment of ischemic stroke. Baicalin is a flavonoid extracted from Scutellaria baicalensis that has been shown to be effective against ischemic stroke; however, its mechanism has not been fully elucidated. Based on network pharmacology, we explored the potential mechanism of baicalin on a system level. After obtaining baicalin structural information from the PubChem database, an approach combined with literature mining and PharmMapper prediction was used to uncover baicalin targets. Ischemic stroke-related targets were gathered with the help of DrugBank, Online Mendelian Inheritance in Man (OMIM), Genetic Association Database (GAD), and Therapeutic Target Database (TTD). Protein-protein interaction (PPI) networks were constructed through the Cytoscape plugin BisoGenet and analyzed by topological methods. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment were carried out via the Database for Annotation, Visualization, and Integrated Discovery (DAVID) server. We obtained a total of 386 potential targets and 5 signaling pathways, including mitogen-activated protein kinase (MAPK), phosphoinositide 3-kinase (PI3K)/protein kinase B (AKT), hypoxia-inducible factor-1 (HIF-1), nuclear factor kappa B (NF-κB), and forkhead box (FOXO) signaling pathways. GO analysis showed that these targets were associated with antiapoptosis, antioxidative stress, anti-inflammation, and other physiopathological processes that are involved in anti-ischemic stroke effects. In summary, the mechanism of baicalin against ischemic stroke involved multiple targets and signaling pathways. Our study provides a network pharmacology framework for future research on traditional Chinese medicine. |
format | Online Article Text |
id | pubmed-6311886 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-63118862019-01-15 Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach Xu, Tian Ma, Chongyang Fan, Shuning Deng, Nang Lian, Yajun Tan, Ling Du, Weizhe Zhang, Shuang Liu, Shuling Ren, Beida Li, Zhenhan Wang, Qinguo Wang, Xueqian Cheng, Fafeng Evid Based Complement Alternat Med Research Article Ischemic stroke is accompanied by high mortality and morbidity rates. At present, there is no effective clinical treatment. Alternatively, traditional Chinese medicine has been widely used in China and Japan for the treatment of ischemic stroke. Baicalin is a flavonoid extracted from Scutellaria baicalensis that has been shown to be effective against ischemic stroke; however, its mechanism has not been fully elucidated. Based on network pharmacology, we explored the potential mechanism of baicalin on a system level. After obtaining baicalin structural information from the PubChem database, an approach combined with literature mining and PharmMapper prediction was used to uncover baicalin targets. Ischemic stroke-related targets were gathered with the help of DrugBank, Online Mendelian Inheritance in Man (OMIM), Genetic Association Database (GAD), and Therapeutic Target Database (TTD). Protein-protein interaction (PPI) networks were constructed through the Cytoscape plugin BisoGenet and analyzed by topological methods. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment were carried out via the Database for Annotation, Visualization, and Integrated Discovery (DAVID) server. We obtained a total of 386 potential targets and 5 signaling pathways, including mitogen-activated protein kinase (MAPK), phosphoinositide 3-kinase (PI3K)/protein kinase B (AKT), hypoxia-inducible factor-1 (HIF-1), nuclear factor kappa B (NF-κB), and forkhead box (FOXO) signaling pathways. GO analysis showed that these targets were associated with antiapoptosis, antioxidative stress, anti-inflammation, and other physiopathological processes that are involved in anti-ischemic stroke effects. In summary, the mechanism of baicalin against ischemic stroke involved multiple targets and signaling pathways. Our study provides a network pharmacology framework for future research on traditional Chinese medicine. Hindawi 2018-12-17 /pmc/articles/PMC6311886/ /pubmed/30647760 http://dx.doi.org/10.1155/2018/2582843 Text en Copyright © 2018 Tian Xu et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Xu, Tian Ma, Chongyang Fan, Shuning Deng, Nang Lian, Yajun Tan, Ling Du, Weizhe Zhang, Shuang Liu, Shuling Ren, Beida Li, Zhenhan Wang, Qinguo Wang, Xueqian Cheng, Fafeng Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach |
title | Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach |
title_full | Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach |
title_fullStr | Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach |
title_full_unstemmed | Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach |
title_short | Systematic Understanding of the Mechanism of Baicalin against Ischemic Stroke through a Network Pharmacology Approach |
title_sort | systematic understanding of the mechanism of baicalin against ischemic stroke through a network pharmacology approach |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6311886/ https://www.ncbi.nlm.nih.gov/pubmed/30647760 http://dx.doi.org/10.1155/2018/2582843 |
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