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Estimating heterogeneous treatment effect by balancing heterogeneity and fitness

BACKGROUND: Estimating heterogeneous treatment effect is a fundamental problem in biological and medical applications. Recently, several recursive partitioning methods have been proposed to identify the subgroups that respond differently towards a treatment, and they rely on a fitness criterion to m...

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Detalles Bibliográficos
Autores principales: Zhang, Weijia, Le, Thuc Duy, Liu, Lin, Li, Jiuyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6311929/
https://www.ncbi.nlm.nih.gov/pubmed/30598067
http://dx.doi.org/10.1186/s12859-018-2521-7
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author Zhang, Weijia
Le, Thuc Duy
Liu, Lin
Li, Jiuyong
author_facet Zhang, Weijia
Le, Thuc Duy
Liu, Lin
Li, Jiuyong
author_sort Zhang, Weijia
collection PubMed
description BACKGROUND: Estimating heterogeneous treatment effect is a fundamental problem in biological and medical applications. Recently, several recursive partitioning methods have been proposed to identify the subgroups that respond differently towards a treatment, and they rely on a fitness criterion to minimize the error between the estimated treatment effects and the unobservable ground truths. RESULTS: In this paper, we propose that a heterogeneity criterion, which maximizes the differences of treatment effects among the subgroups, also needs to be considered. Moreover, we show that better performances can be achieved when the fitness and the heterogeneous criteria are considered simultaneously. Selecting the optimal splitting points then becomes a multi-objective problem; however, a solution that achieves optimal in both aspects are often not available. To solve this problem, we propose a multi-objective splitting procedure to balance both criteria. The proposed procedure is computationally efficient and fits naturally into the existing recursive partitioning framework. Experimental results show that the proposed multi-objective approach performs consistently better than existing ones. CONCLUSION: Heterogeneity should be considered with fitness in heterogeneous treatment effect estimation, and the proposed multi-objective splitting procedure achieves the best performance by balancing both criteria.
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spelling pubmed-63119292019-01-07 Estimating heterogeneous treatment effect by balancing heterogeneity and fitness Zhang, Weijia Le, Thuc Duy Liu, Lin Li, Jiuyong BMC Bioinformatics Research BACKGROUND: Estimating heterogeneous treatment effect is a fundamental problem in biological and medical applications. Recently, several recursive partitioning methods have been proposed to identify the subgroups that respond differently towards a treatment, and they rely on a fitness criterion to minimize the error between the estimated treatment effects and the unobservable ground truths. RESULTS: In this paper, we propose that a heterogeneity criterion, which maximizes the differences of treatment effects among the subgroups, also needs to be considered. Moreover, we show that better performances can be achieved when the fitness and the heterogeneous criteria are considered simultaneously. Selecting the optimal splitting points then becomes a multi-objective problem; however, a solution that achieves optimal in both aspects are often not available. To solve this problem, we propose a multi-objective splitting procedure to balance both criteria. The proposed procedure is computationally efficient and fits naturally into the existing recursive partitioning framework. Experimental results show that the proposed multi-objective approach performs consistently better than existing ones. CONCLUSION: Heterogeneity should be considered with fitness in heterogeneous treatment effect estimation, and the proposed multi-objective splitting procedure achieves the best performance by balancing both criteria. BioMed Central 2018-12-31 /pmc/articles/PMC6311929/ /pubmed/30598067 http://dx.doi.org/10.1186/s12859-018-2521-7 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Zhang, Weijia
Le, Thuc Duy
Liu, Lin
Li, Jiuyong
Estimating heterogeneous treatment effect by balancing heterogeneity and fitness
title Estimating heterogeneous treatment effect by balancing heterogeneity and fitness
title_full Estimating heterogeneous treatment effect by balancing heterogeneity and fitness
title_fullStr Estimating heterogeneous treatment effect by balancing heterogeneity and fitness
title_full_unstemmed Estimating heterogeneous treatment effect by balancing heterogeneity and fitness
title_short Estimating heterogeneous treatment effect by balancing heterogeneity and fitness
title_sort estimating heterogeneous treatment effect by balancing heterogeneity and fitness
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6311929/
https://www.ncbi.nlm.nih.gov/pubmed/30598067
http://dx.doi.org/10.1186/s12859-018-2521-7
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