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Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective

Employing computer vision to extract useful information from images and videos is becoming a key technique for identifying phenotypic changes in plants. Here, we review the emerging aspects of computer vision for automated plant phenotyping. Recent advances in image analysis empowered by machine lea...

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Autores principales: Mochida, Keiichi, Koda, Satoru, Inoue, Komaki, Hirayama, Takashi, Tanaka, Shojiro, Nishii, Ryuei, Melgani, Farid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6312910/
https://www.ncbi.nlm.nih.gov/pubmed/30520975
http://dx.doi.org/10.1093/gigascience/giy153
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author Mochida, Keiichi
Koda, Satoru
Inoue, Komaki
Hirayama, Takashi
Tanaka, Shojiro
Nishii, Ryuei
Melgani, Farid
author_facet Mochida, Keiichi
Koda, Satoru
Inoue, Komaki
Hirayama, Takashi
Tanaka, Shojiro
Nishii, Ryuei
Melgani, Farid
author_sort Mochida, Keiichi
collection PubMed
description Employing computer vision to extract useful information from images and videos is becoming a key technique for identifying phenotypic changes in plants. Here, we review the emerging aspects of computer vision for automated plant phenotyping. Recent advances in image analysis empowered by machine learning-based techniques, including convolutional neural network-based modeling, have expanded their application to assist high-throughput plant phenotyping. Combinatorial use of multiple sensors to acquire various spectra has allowed us to noninvasively obtain a series of datasets, including those related to the development and physiological responses of plants throughout their life. Automated phenotyping platforms accelerate the elucidation of gene functions associated with traits in model plants under controlled conditions. Remote sensing techniques with image collection platforms, such as unmanned vehicles and tractors, are also emerging for large-scale field phenotyping for crop breeding and precision agriculture. Computer vision-based phenotyping will play significant roles in both the nowcasting and forecasting of plant traits through modeling of genotype/phenotype relationships.
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spelling pubmed-63129102019-01-07 Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective Mochida, Keiichi Koda, Satoru Inoue, Komaki Hirayama, Takashi Tanaka, Shojiro Nishii, Ryuei Melgani, Farid Gigascience Review Employing computer vision to extract useful information from images and videos is becoming a key technique for identifying phenotypic changes in plants. Here, we review the emerging aspects of computer vision for automated plant phenotyping. Recent advances in image analysis empowered by machine learning-based techniques, including convolutional neural network-based modeling, have expanded their application to assist high-throughput plant phenotyping. Combinatorial use of multiple sensors to acquire various spectra has allowed us to noninvasively obtain a series of datasets, including those related to the development and physiological responses of plants throughout their life. Automated phenotyping platforms accelerate the elucidation of gene functions associated with traits in model plants under controlled conditions. Remote sensing techniques with image collection platforms, such as unmanned vehicles and tractors, are also emerging for large-scale field phenotyping for crop breeding and precision agriculture. Computer vision-based phenotyping will play significant roles in both the nowcasting and forecasting of plant traits through modeling of genotype/phenotype relationships. Oxford University Press 2018-12-06 /pmc/articles/PMC6312910/ /pubmed/30520975 http://dx.doi.org/10.1093/gigascience/giy153 Text en © The Author(s) 2018. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Mochida, Keiichi
Koda, Satoru
Inoue, Komaki
Hirayama, Takashi
Tanaka, Shojiro
Nishii, Ryuei
Melgani, Farid
Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective
title Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective
title_full Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective
title_fullStr Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective
title_full_unstemmed Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective
title_short Computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective
title_sort computer vision-based phenotyping for improvement of plant productivity: a machine learning perspective
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6312910/
https://www.ncbi.nlm.nih.gov/pubmed/30520975
http://dx.doi.org/10.1093/gigascience/giy153
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