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Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia
The survival of wetland plants in iron, sulfur and heavy metals-rich mine tailing ponds has been commonly attributed to the iron plaque (IP) on the root surface that acts as a protective barrier. However, the contribution of bacteria potentially regulates the iron-sulfur cycle and heavy metal exclus...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6313532/ https://www.ncbi.nlm.nih.gov/pubmed/30469475 http://dx.doi.org/10.3390/ijerph15122610 |
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author | Chi, Haochun Yang, Lu Yang, Wenjing Li, Yuanyuan Chen, Ziwu Huang, Lige Chao, Yuanqing Qiu, Rongliang Wang, Shizhong |
author_facet | Chi, Haochun Yang, Lu Yang, Wenjing Li, Yuanyuan Chen, Ziwu Huang, Lige Chao, Yuanqing Qiu, Rongliang Wang, Shizhong |
author_sort | Chi, Haochun |
collection | PubMed |
description | The survival of wetland plants in iron, sulfur and heavy metals-rich mine tailing ponds has been commonly attributed to the iron plaque (IP) on the root surface that acts as a protective barrier. However, the contribution of bacteria potentially regulates the iron-sulfur cycle and heavy metal exclusion at the root surface has not been studied in depth, particularly from a microbial ecology perspective. In this study, a pot experiment using Typha latifolia, a typical wetland plant, in non-polluted soil (NP) and tailing soil (T) was conducted. Samples from four zones, comprising non-rhizosphere soil (NR), rhizosphere soil (R) and internal (I) and external (E) layers of iron plaque, were collected from the NP and T and analyzed by 16S rRNA sequencing. Simpson index of the genus level showed greater diversities of bacterial community in the NP and its I zone is the most important part of the rhizosphere. PICRUSt predicted that the I zones in both NP and T harbored most of the functional genes. Specifically, functional genes related to sulfur relay and metabolism occurred more in the I zone in the T, whereas those related to iron acquisition and carbon and nitrogen circulation occurred more in the I zone in the NP. Analysis of dominant bacterial communities at genus level showed highest abundance of heavy metal resistant genus Burkholderia in the E zones in both soils, indicating that heavy metal resistance of Typha latifolia driven by Burkholderia mainly occurred at the external layer of IP. Moreover, many bacterial genera, such as Acidithiobacillus, Ferritrophicum, Thiomonas, Metallibacterium and Sideroxydans, involved in iron and sulfur metabolisms were found in the T and most showed higher abundance in the I zone than in the other zones. This work, as the first endeavor to separate the iron plaque into external and internal layers and investigate the variations of the bacterial communities therein, can provide an insight for further understanding the survival strategy of wetland plants, e.g., Typha latifolia, in extreme environment. |
format | Online Article Text |
id | pubmed-6313532 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-63135322019-06-17 Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia Chi, Haochun Yang, Lu Yang, Wenjing Li, Yuanyuan Chen, Ziwu Huang, Lige Chao, Yuanqing Qiu, Rongliang Wang, Shizhong Int J Environ Res Public Health Article The survival of wetland plants in iron, sulfur and heavy metals-rich mine tailing ponds has been commonly attributed to the iron plaque (IP) on the root surface that acts as a protective barrier. However, the contribution of bacteria potentially regulates the iron-sulfur cycle and heavy metal exclusion at the root surface has not been studied in depth, particularly from a microbial ecology perspective. In this study, a pot experiment using Typha latifolia, a typical wetland plant, in non-polluted soil (NP) and tailing soil (T) was conducted. Samples from four zones, comprising non-rhizosphere soil (NR), rhizosphere soil (R) and internal (I) and external (E) layers of iron plaque, were collected from the NP and T and analyzed by 16S rRNA sequencing. Simpson index of the genus level showed greater diversities of bacterial community in the NP and its I zone is the most important part of the rhizosphere. PICRUSt predicted that the I zones in both NP and T harbored most of the functional genes. Specifically, functional genes related to sulfur relay and metabolism occurred more in the I zone in the T, whereas those related to iron acquisition and carbon and nitrogen circulation occurred more in the I zone in the NP. Analysis of dominant bacterial communities at genus level showed highest abundance of heavy metal resistant genus Burkholderia in the E zones in both soils, indicating that heavy metal resistance of Typha latifolia driven by Burkholderia mainly occurred at the external layer of IP. Moreover, many bacterial genera, such as Acidithiobacillus, Ferritrophicum, Thiomonas, Metallibacterium and Sideroxydans, involved in iron and sulfur metabolisms were found in the T and most showed higher abundance in the I zone than in the other zones. This work, as the first endeavor to separate the iron plaque into external and internal layers and investigate the variations of the bacterial communities therein, can provide an insight for further understanding the survival strategy of wetland plants, e.g., Typha latifolia, in extreme environment. MDPI 2018-11-22 2018-12 /pmc/articles/PMC6313532/ /pubmed/30469475 http://dx.doi.org/10.3390/ijerph15122610 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Chi, Haochun Yang, Lu Yang, Wenjing Li, Yuanyuan Chen, Ziwu Huang, Lige Chao, Yuanqing Qiu, Rongliang Wang, Shizhong Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia |
title | Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia |
title_full | Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia |
title_fullStr | Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia |
title_full_unstemmed | Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia |
title_short | Variation of the Bacterial Community in the Rhizoplane Iron Plaque of the Wetland Plant Typha latifolia |
title_sort | variation of the bacterial community in the rhizoplane iron plaque of the wetland plant typha latifolia |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6313532/ https://www.ncbi.nlm.nih.gov/pubmed/30469475 http://dx.doi.org/10.3390/ijerph15122610 |
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