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Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships

Rice (Oryza sativa L.) processing yields ~60 million metric tons of bran annually. Rice genes producing bran metabolites of nutritional and human health importance were assessed across 17 diverse cultivars from seven countries using non-targeted metabolomics, and resulted in 378–430 metabolites. Gam...

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Autores principales: Zarei, Iman, Luna, Emily, Leach, Jan E., McClung, Anna, Vilchez, Samuel, Koita, Ousmane, Ryan, Elizabeth P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6315861/
https://www.ncbi.nlm.nih.gov/pubmed/30304872
http://dx.doi.org/10.3390/metabo8040063
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author Zarei, Iman
Luna, Emily
Leach, Jan E.
McClung, Anna
Vilchez, Samuel
Koita, Ousmane
Ryan, Elizabeth P.
author_facet Zarei, Iman
Luna, Emily
Leach, Jan E.
McClung, Anna
Vilchez, Samuel
Koita, Ousmane
Ryan, Elizabeth P.
author_sort Zarei, Iman
collection PubMed
description Rice (Oryza sativa L.) processing yields ~60 million metric tons of bran annually. Rice genes producing bran metabolites of nutritional and human health importance were assessed across 17 diverse cultivars from seven countries using non-targeted metabolomics, and resulted in 378–430 metabolites. Gambiaka cultivar had the highest number and Njavara had the lowest number of metabolites. The 71 rice bran compounds of significant variation by cultivar included 21 amino acids, seven carbohydrates, two metabolites from cofactors and vitamins, 33 lipids, six nucleotides, and two secondary metabolites. Tryptophan, α-ketoglutarate, γ-tocopherol/β-tocopherol, and γ-tocotrienol are examples of bran metabolites with extensive cultivar variation and genetic information. Thirty-four rice bran components that varied between cultivars linked to 535 putative biosynthetic genes using to the OryzaCyc 4.0, Plant Metabolic Network database. Rice genes responsible for bran composition with animal and human health importance is available for rice breeding programs to utilize in crop improvement.
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spelling pubmed-63158612019-01-10 Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships Zarei, Iman Luna, Emily Leach, Jan E. McClung, Anna Vilchez, Samuel Koita, Ousmane Ryan, Elizabeth P. Metabolites Article Rice (Oryza sativa L.) processing yields ~60 million metric tons of bran annually. Rice genes producing bran metabolites of nutritional and human health importance were assessed across 17 diverse cultivars from seven countries using non-targeted metabolomics, and resulted in 378–430 metabolites. Gambiaka cultivar had the highest number and Njavara had the lowest number of metabolites. The 71 rice bran compounds of significant variation by cultivar included 21 amino acids, seven carbohydrates, two metabolites from cofactors and vitamins, 33 lipids, six nucleotides, and two secondary metabolites. Tryptophan, α-ketoglutarate, γ-tocopherol/β-tocopherol, and γ-tocotrienol are examples of bran metabolites with extensive cultivar variation and genetic information. Thirty-four rice bran components that varied between cultivars linked to 535 putative biosynthetic genes using to the OryzaCyc 4.0, Plant Metabolic Network database. Rice genes responsible for bran composition with animal and human health importance is available for rice breeding programs to utilize in crop improvement. MDPI 2018-10-09 /pmc/articles/PMC6315861/ /pubmed/30304872 http://dx.doi.org/10.3390/metabo8040063 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zarei, Iman
Luna, Emily
Leach, Jan E.
McClung, Anna
Vilchez, Samuel
Koita, Ousmane
Ryan, Elizabeth P.
Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships
title Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships
title_full Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships
title_fullStr Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships
title_full_unstemmed Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships
title_short Comparative Rice Bran Metabolomics across Diverse Cultivars and Functional Rice Gene–Bran Metabolite Relationships
title_sort comparative rice bran metabolomics across diverse cultivars and functional rice gene–bran metabolite relationships
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6315861/
https://www.ncbi.nlm.nih.gov/pubmed/30304872
http://dx.doi.org/10.3390/metabo8040063
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