Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24

The complete genome of a novel double-stranded (ds) RNA mycovirus, named as Rhizoctonia solani partitivirus 5 (RsPV5), isolated from rice sheath blight fungus R. solani AG-1 IA strain C24, was sequenced and analysed. RsPV5 consists of two segments, dsRNA-1 (1899 nucleotides) and dsRNA-2 (1787 nucleo...

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Autores principales: Liu, Chen, Zeng, Miaolin, Zhang, Meiling, Shu, Canwei, Zhou, Erxun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Communication
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6316540/
https://www.ncbi.nlm.nih.gov/pubmed/30544926
http://dx.doi.org/10.3390/v10120703
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author Liu, Chen
Zeng, Miaolin
Zhang, Meiling
Shu, Canwei
Zhou, Erxun
author_facet Liu, Chen
Zeng, Miaolin
Zhang, Meiling
Shu, Canwei
Zhou, Erxun
author_sort Liu, Chen
collection PubMed
description The complete genome of a novel double-stranded (ds) RNA mycovirus, named as Rhizoctonia solani partitivirus 5 (RsPV5), isolated from rice sheath blight fungus R. solani AG-1 IA strain C24, was sequenced and analysed. RsPV5 consists of two segments, dsRNA-1 (1899 nucleotides) and dsRNA-2 (1787 nucleotides). DsRNA-1 has an open reading frame (ORF) 1 that potentially codes for a protein of 584 amino acid (aa) containing the conserved motifs of a RNA-dependent RNA polymerase (RdRp), and dsRNA-2 also contains a ORF 2, encoding a putative capsid protein (CP) of 513 aa. Phylogenetic analysis revealed that RsPV5 clustered together with six other viruses in an independent clade of the genus Alphapartitivirus, indicating that RsPV5 was a new member of the genus Alphapartitivirus, within the family Partitiviridae.
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spelling pubmed-63165402019-01-10 Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24 Liu, Chen Zeng, Miaolin Zhang, Meiling Shu, Canwei Zhou, Erxun Viruses Communication The complete genome of a novel double-stranded (ds) RNA mycovirus, named as Rhizoctonia solani partitivirus 5 (RsPV5), isolated from rice sheath blight fungus R. solani AG-1 IA strain C24, was sequenced and analysed. RsPV5 consists of two segments, dsRNA-1 (1899 nucleotides) and dsRNA-2 (1787 nucleotides). DsRNA-1 has an open reading frame (ORF) 1 that potentially codes for a protein of 584 amino acid (aa) containing the conserved motifs of a RNA-dependent RNA polymerase (RdRp), and dsRNA-2 also contains a ORF 2, encoding a putative capsid protein (CP) of 513 aa. Phylogenetic analysis revealed that RsPV5 clustered together with six other viruses in an independent clade of the genus Alphapartitivirus, indicating that RsPV5 was a new member of the genus Alphapartitivirus, within the family Partitiviridae. MDPI 2018-12-11 /pmc/articles/PMC6316540/ /pubmed/30544926 http://dx.doi.org/10.3390/v10120703 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Liu, Chen
Zeng, Miaolin
Zhang, Meiling
Shu, Canwei
Zhou, Erxun
Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24
title Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24
title_full Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24
title_fullStr Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24
title_full_unstemmed Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24
title_short Complete Nucleotide Sequence of a Partitivirus from Rhizoctonia solani AG-1 IA Strain C24
title_sort complete nucleotide sequence of a partitivirus from rhizoctonia solani ag-1 ia strain c24
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6316540/
https://www.ncbi.nlm.nih.gov/pubmed/30544926
http://dx.doi.org/10.3390/v10120703
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